The 2.0 version of rSNPBase

Variant report

Variant rs1107462
Chromosome Location chr7:101809439-101809440
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:101777400-101812800 Weak transcription Fetal Lung lung
2 chr7:101778400-101812000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr7:101784800-101814400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr7:101784800-101821600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr7:101784800-101822600 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr7:101789800-101812800 Weak transcription Brain Angular Gyrus brain
7 chr7:101790600-101811400 Weak transcription Brain Substantia Nigra brain
8 chr7:101790800-101811800 Weak transcription Osteobl bone
9 chr7:101790800-101812600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr7:101791000-101812000 Weak transcription Brain Hippocampus Middle brain
11 chr7:101793800-101812600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr7:101794800-101816800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr7:101796000-101810800 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr7:101797000-101814200 Weak transcription Hela-S3 cervix
15 chr7:101797200-101812000 Weak transcription Muscle Satellite Cultured Cells --
16 chr7:101797200-101812600 Weak transcription Stomach Mucosa stomach
17 chr7:101797200-101812800 Weak transcription Brain Germinal Matrix brain
18 chr7:101797200-101812800 Weak transcription HSMM muscle
19 chr7:101797200-101814000 Weak transcription GM12878-XiMat blood
20 chr7:101797200-101818400 Weak transcription Colon Smooth Muscle Colon
21 chr7:101797200-101818600 Weak transcription Rectal Smooth Muscle rectum
22 chr7:101797200-101821400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr7:101797200-101827800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr7:101797200-101832000 Weak transcription Fetal Heart heart
25 chr7:101797400-101809600 Weak transcription HSMMtube muscle
26 chr7:101797400-101811400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr7:101797800-101852200 Weak transcription NHEK skin
28 chr7:101798200-101812800 Weak transcription Brain Anterior Caudate brain
29 chr7:101798600-101812600 Weak transcription Brain Cingulate Gyrus brain
30 chr7:101799800-101812600 Weak transcription Fetal Kidney kidney
31 chr7:101799800-101815000 Weak transcription K562 blood
32 chr7:101800000-101811600 Strong transcription Fetal Stomach stomach
33 chr7:101800000-101812800 Weak transcription NHDF-Ad bronchial
34 chr7:101800400-101850000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr7:101800600-101812800 Weak transcription Fetal Brain Male brain
36 chr7:101800600-101851800 Strong transcription Fetal Intestine Small intestine
37 chr7:101801000-101810200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr7:101801000-101810400 Strong transcription Fetal Intestine Large intestine
39 chr7:101801200-101819800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr7:101801200-101864000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr7:101802000-101812000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr7:101802200-101812800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr7:101802200-101812800 Weak transcription Ovary ovary
44 chr7:101802200-101813000 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr7:101802600-101810000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr7:101802800-101809600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr7:101802800-101809800 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr7:101802800-101812600 Weak transcription NH-A brain
49 chr7:101802800-101813600 Weak transcription Primary T cells fromperipheralblood blood
50 chr7:101803000-101809800 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015