The 2.0 version of rSNPBase

Variant report

Variant rs11118697
Chromosome Location chr1:221508793-221508794
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:221506200-221509200 Enhancers Lung lung
2 chr1:221506400-221509000 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr1:221506400-221509800 Enhancers Fetal Stomach stomach
4 chr1:221506600-221509600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:221507000-221509200 Enhancers Primary hematopoietic stem cells blood
6 chr1:221507000-221510000 Enhancers Ovary ovary
7 chr1:221507200-221508800 Enhancers Adipose Nuclei Adipose
8 chr1:221507200-221508800 Enhancers Rectal Smooth Muscle rectum
9 chr1:221507200-221509000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:221507200-221509000 Enhancers Spleen Spleen
11 chr1:221507200-221509600 Enhancers Rectal Mucosa Donor 31 rectum
12 chr1:221507200-221509600 Enhancers Skeletal Muscle Female skeletal muscle
13 chr1:221507200-221509800 Enhancers Brain Cingulate Gyrus brain
14 chr1:221507200-221510000 Enhancers Placenta Placenta
15 chr1:221507200-221511000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:221507400-221510600 Enhancers Colon Smooth Muscle Colon
17 chr1:221507600-221508800 Enhancers NHLF lung
18 chr1:221507800-221508800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:221507800-221509400 Enhancers Brain Inferior Temporal Lobe brain
20 chr1:221507800-221509600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:221507800-221509600 Enhancers Right Atrium heart
22 chr1:221507800-221509800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:221507800-221511200 Enhancers Fetal Lung lung
24 chr1:221508000-221508800 Enhancers Muscle Satellite Cultured Cells --
25 chr1:221508000-221508800 Enhancers Brain Anterior Caudate brain
26 chr1:221508000-221508800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:221508000-221509000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:221508000-221509000 Enhancers Duodenum Mucosa Duodenum
29 chr1:221508000-221509200 Enhancers Stomach Smooth Muscle stomach
30 chr1:221508000-221509400 Enhancers Skeletal Muscle Male skeletal muscle
31 chr1:221508000-221509800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:221508000-221510000 Flanking Active TSS Hela-S3 cervix
33 chr1:221508200-221508800 Enhancers ES-WA7 Cell Line embryonic stem cell
34 chr1:221508200-221508800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:221508200-221508800 Enhancers HSMMtube muscle
36 chr1:221508200-221509000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:221508200-221509200 Enhancers HSMM muscle
38 chr1:221508200-221509400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:221508200-221509400 Weak transcription Psoas Muscle Psoas
40 chr1:221508200-221509800 Enhancers NH-A brain
41 chr1:221508400-221508800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:221508400-221509000 Weak transcription Aorta Aorta
43 chr1:221508400-221509200 Active TSS Brain Substantia Nigra brain
44 chr1:221508400-221509200 Enhancers Fetal Thymus thymus
45 chr1:221508400-221509400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:221508400-221509400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:221508400-221509400 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr1:221508400-221509400 Enhancers HMEC breast
49 chr1:221508400-221509600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr1:221508400-221509600 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015