Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10864166	0.92[CEU][hapmap];0.85[CHB][hapmap]
rs11120519	0.84[CEU][hapmap]
rs11120539	0.82[EUR][1000 genomes]
rs11120541	0.82[EUR][1000 genomes]
rs11120542	0.82[EUR][1000 genomes]
rs11583745	0.88[CEU][hapmap];0.98[TSI][hapmap]
rs12038616	0.88[CEU][hapmap]
rs12038695	0.88[CEU][hapmap]
rs12740245	0.84[CEU][hapmap]
rs12753507	0.84[CEU][hapmap]
rs1339401	0.82[EUR][1000 genomes]
rs1416653	0.82[EUR][1000 genomes]
rs1416654	0.82[EUR][1000 genomes]
rs1416655	0.82[EUR][1000 genomes]
rs1538547	0.88[CEU][hapmap]
rs17024500	0.92[CEU][hapmap];0.85[CHB][hapmap];0.91[GIH][hapmap];0.98[TSI][hapmap]
rs2089427	0.85[EUR][1000 genomes]
rs4233309	0.92[CEU][hapmap]
rs5025775	0.92[CEU][hapmap];0.85[CHB][hapmap]
rs6540886	0.92[CEU][hapmap];0.85[CHB][hapmap];0.91[GIH][hapmap];0.98[TSI][hapmap]
rs6540887	0.92[CEU][hapmap];0.81[CHB][hapmap]
rs6670661	0.92[CEU][hapmap];0.85[CHB][hapmap]
rs6674743	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7522552	0.88[CEU][hapmap]
rs7531046	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832537	chr1:215509026-215705105	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215548600-215549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr1:215548800-215549800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:215549000-215551600	Enhancers	Osteobl	bone

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