Variant report

Variant	rs111383894
Chromosome Location	chr11:46940118-46940119
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:46938691..46940925-chr17:56734920..56736797,2	MCF-7	breast:
2	chr11:46846941..46849918-chr11:46939245..46941639,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000175216	Chromatin interaction
ENSG00000202077	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3354576	chr11:46938801-46941349	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:115 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46937800-46940400	Active TSS	Breast Myoepithelial Primary Cells	Breast
2	chr11:46937800-46940400	Active TSS	Brain Anterior Caudate	brain
3	chr11:46937800-46940400	Active TSS	Brain Cingulate Gyrus	brain
4	chr11:46937800-46940400	Active TSS	HSMMtube	muscle
5	chr11:46938000-46940400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr11:46938000-46940600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr11:46938000-46940600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr11:46938000-46940600	Active TSS	Ovary	ovary
9	chr11:46938000-46940600	Flanking Bivalent TSS/Enh	Thymus	Thymus
10	chr11:46938000-46940800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr11:46938000-46940800	Active TSS	H9 Cell Line	embryonic stem cell
12	chr11:46938000-46941200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr11:46938200-46940400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
14	chr11:46938200-46940400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr11:46938200-46940400	Active TSS	Cortex derived primary cultured neurospheres	brain
16	chr11:46938200-46940400	Active TSS	Brain Substantia Nigra	brain
17	chr11:46938200-46940400	Active TSS	Pancreatic Islets	Pancreatic Islet
18	chr11:46938200-46940400	Active TSS	Fetal Lung	lung
19	chr11:46938200-46940400	Active TSS	A549	lung
20	chr11:46938200-46940400	Active TSS	NHDF-Ad	bronchial
21	chr11:46938200-46940600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr11:46938200-46940600	Active TSS	Aorta	Aorta
23	chr11:46938200-46941000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
24	chr11:46938400-46940400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr11:46938400-46940400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr11:46938400-46940400	Active TSS	Brain Angular Gyrus	brain
27	chr11:46938400-46940400	Active TSS	Colon Smooth Muscle	Colon
28	chr11:46938400-46940400	Active TSS	Pancreas	Pancrea
29	chr11:46938400-46940600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
30	chr11:46938400-46940600	Active TSS	Esophagus	oesophagus
31	chr11:46938400-46940600	Active TSS	Left Ventricle	heart
32	chr11:46938600-46940400	Active TSS	Sigmoid Colon	Sigmoid Colon
33	chr11:46938600-46940400	Active TSS	Small Intestine	intestine
34	chr11:46938800-46940400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr11:46939000-46940400	Active TSS	Hela-S3	cervix
36	chr11:46939000-46940600	Active TSS	HSMM	muscle
37	chr11:46939200-46940200	Active TSS	Lung	lung
38	chr11:46939200-46940400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr11:46939200-46940400	Active TSS	Duodenum Mucosa	Duodenum
40	chr11:46939200-46940400	Active TSS	Rectal Smooth Muscle	rectum
41	chr11:46939200-46940400	Active TSS	NHLF	lung
42	chr11:46939200-46940600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr11:46939400-46940200	Active TSS	Gastric	stomach
44	chr11:46939400-46940400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr11:46939400-46940400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr11:46939400-46940400	Active TSS	HUES6 Cell Line	embryonic stem cell
47	chr11:46939400-46940400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
48	chr11:46939400-46940400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr11:46939400-46940400	Active TSS	Brain Inferior Temporal Lobe	brain
50	chr11:46939400-46940400	Active TSS	Rectal Mucosa Donor 29	rectum

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