Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10868852	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11141314	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11141421	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11141422	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11141432	0.83[ASN][1000 genomes]
rs11141455	0.81[ASN][1000 genomes]
rs11141457	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11141466	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11141556	0.88[AMR][1000 genomes]
rs11141675	0.88[AMR][1000 genomes]
rs11141974	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11141997	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11142075	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17056009	0.83[AMR][1000 genomes]
rs263801	0.84[ASN][1000 genomes]
rs265101	0.84[ASN][1000 genomes]
rs265106	0.83[ASN][1000 genomes]
rs2987708	0.82[ASN][1000 genomes]
rs443057	0.82[ASN][1000 genomes]
rs4744966	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs624149	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427847	chr9:70318730-71153527	Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:70982400-71031200	Weak transcription	Fetal Lung	lung
2	chr9:70987800-71031800	Weak transcription	Fetal Stomach	stomach
3	chr9:70997800-71052600	Weak transcription	HSMMtube	muscle
4	chr9:70999000-71031800	Weak transcription	Colon Smooth Muscle	Colon
5	chr9:71007000-71031000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr9:71007600-71032000	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr9:71019600-71032000	Weak transcription	Left Ventricle	heart
8	chr9:71020200-71032000	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr9:71023200-71031800	Weak transcription	Stomach Smooth Muscle	stomach
10	chr9:71027600-71031000	Weak transcription	Fetal Heart	heart
11	chr9:71027600-71033000	Weak transcription	Psoas Muscle	Psoas
12	chr9:71027600-71041800	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr9:71028000-71031000	Weak transcription	Rectal Smooth Muscle	rectum

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