The 2.0 version of rSNPBase

Variant report

Variant rs111542169
Chromosome Location chr15:34595170-34595171
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34551200-34608800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr15:34555200-34606600 Weak transcription Thymus Thymus
3 chr15:34577600-34608800 Weak transcription Duodenum Mucosa Duodenum
4 chr15:34577600-34610200 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr15:34577800-34608800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr15:34578200-34606800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr15:34579000-34603800 Weak transcription Primary T cells fromperipheralblood blood
8 chr15:34582200-34599000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr15:34582600-34609600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr15:34582600-34610200 Weak transcription Fetal Lung lung
11 chr15:34583400-34609600 Weak transcription Adipose Nuclei Adipose
12 chr15:34583800-34610600 Weak transcription Pancreas Pancrea
13 chr15:34585000-34609600 Weak transcription Spleen Spleen
14 chr15:34585000-34610600 Weak transcription Lung lung
15 chr15:34585200-34596400 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr15:34585200-34598600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr15:34585200-34609600 Weak transcription Fetal Stomach stomach
18 chr15:34585200-34615600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr15:34585400-34602200 Weak transcription Esophagus oesophagus
20 chr15:34585400-34608600 Weak transcription Liver Liver
21 chr15:34585800-34604600 Weak transcription Fetal Intestine Large intestine
22 chr15:34585800-34610400 Weak transcription Ovary ovary
23 chr15:34586600-34609800 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr15:34587000-34610200 Weak transcription Fetal Intestine Small intestine
25 chr15:34587800-34604400 Weak transcription Primary monocytes fromperipheralblood blood
26 chr15:34589800-34597200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr15:34589800-34600400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr15:34589800-34610600 Weak transcription Brain Cingulate Gyrus brain
29 chr15:34590000-34598400 Weak transcription Left Ventricle heart
30 chr15:34590000-34609000 Weak transcription Colon Smooth Muscle Colon
31 chr15:34590000-34610400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr15:34590000-34610600 Weak transcription Small Intestine intestine
33 chr15:34590200-34603800 Weak transcription Primary B cells from peripheral blood blood
34 chr15:34590400-34596800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr15:34590400-34599600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr15:34590400-34604200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr15:34591000-34595400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr15:34591400-34595800 Weak transcription GM12878-XiMat blood
39 chr15:34592000-34595200 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr15:34592000-34598600 Weak transcription Aorta Aorta
41 chr15:34592200-34600400 Weak transcription Primary B cells from cord blood blood
42 chr15:34592200-34608400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr15:34592600-34603800 Weak transcription Primary T cells from cord blood blood
44 chr15:34593000-34610600 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr15:34593600-34605400 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr15:34593800-34609000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr15:34594000-34607000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr15:34594000-34609400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr15:34594000-34610600 Weak transcription Gastric stomach
50 chr15:34594200-34595800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015