Variant report

Variant	rs11155710
Chromosome Location	chr6:150501505-150501506
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:150494832..150497626-chr6:150501438..150503666,2	K562	blood:
2	chr6:150500271..150503128-chr6:150513196..150516090,3	MCF-7	breast:
3	chr6:150500428..150502661-chr6:150644242..150645820,2	K562	blood:
4	chr6:150495241..150496949-chr6:150500349..150502096,2	MCF-7	breast:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11155709	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11751046	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11755697	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11759065	0.80[CEU][hapmap];0.95[YRI][hapmap];0.83[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs12195287	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12215483	0.86[CHB][hapmap]
rs17079397	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9322250	0.80[CEU][hapmap]
rs9384212	0.82[AFR][1000 genomes]
rs9397194	0.80[CEU][hapmap]
rs9397725	0.83[EUR][1000 genomes]
rs9478551	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150491400-150506400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:150497000-150502000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:150497200-150502400	Enhancers	Left Ventricle	heart
4	chr6:150497800-150511000	Weak transcription	NHEK	skin
5	chr6:150499400-150501600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:150499600-150501800	Weak transcription	Psoas Muscle	Psoas
7	chr6:150499600-150503600	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr6:150499600-150504600	Weak transcription	Colonic Mucosa	Colon
9	chr6:150499600-150505200	Weak transcription	Right Ventricle	heart
10	chr6:150499600-150506000	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr6:150499600-150519600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr6:150499800-150503400	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr6:150500000-150502400	Enhancers	K562	blood
14	chr6:150500000-150508000	Enhancers	Fetal Heart	heart
15	chr6:150500200-150503600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr6:150500800-150502000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr6:150500800-150502000	Enhancers	Rectal Mucosa Donor 31	rectum
18	chr6:150501200-150501800	Weak transcription	Right Atrium	heart
19	chr6:150501400-150501600	Enhancers	Muscle Satellite Cultured Cells	--
20	chr6:150501400-150501600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:150501400-150502000	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr6:150501400-150502000	Enhancers	Esophagus	oesophagus
23	chr6:150501400-150502000	Enhancers	Pancreatic Islets	Pancreatic Islet
24	chr6:150501400-150502000	Enhancers	HMEC	breast

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