The 2.0 version of rSNPBase

Variant report

Variant rs11164834
Chromosome Location chr1:93371510-93371511
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93364000-93373000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:93364600-93375200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:93365000-93373800 Weak transcription Primary T cells fromperipheralblood blood
4 chr1:93365800-93374600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:93366400-93373800 Weak transcription Liver Liver
6 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:93366600-93375000 Weak transcription Brain Angular Gyrus brain
8 chr1:93367000-93390400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:93367600-93373000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:93367600-93375000 Weak transcription Fetal Intestine Small intestine
11 chr1:93367800-93373000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:93367800-93373200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:93367800-93373600 Weak transcription HSMMtube muscle
14 chr1:93367800-93375200 Weak transcription HSMM muscle
15 chr1:93367800-93379200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:93368000-93372200 Weak transcription Psoas Muscle Psoas
17 chr1:93368000-93373200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:93368000-93375800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:93368000-93375800 Weak transcription Aorta Aorta
20 chr1:93368200-93373000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:93368200-93373800 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr1:93368200-93375200 Weak transcription Brain Cingulate Gyrus brain
23 chr1:93368400-93375000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr1:93369000-93394200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:93369400-93373600 Weak transcription HepG2 liver
26 chr1:93370000-93374000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr1:93370000-93376400 Weak transcription Dnd41 blood
28 chr1:93370200-93371600 Weak transcription Primary T cells from cord blood blood
29 chr1:93370200-93374000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:93370200-93378000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr1:93370200-93378600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:93370400-93395000 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:93370600-93395000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr1:93371000-93372000 Strong transcription Primary B cells from peripheral blood blood
35 chr1:93371000-93374200 Strong transcription Primary B cells from cord blood blood
36 chr1:93371000-93374800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:93371000-93376400 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:93371200-93372600 ZNF genes & repeats GM12878-XiMat blood
39 chr1:93371400-93371600 Strong transcription Primary T helper cells fromperipheralblood blood
40 chr1:93371400-93376600 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015