Variant report

Variant	rs11165007
Chromosome Location	chr1:94278128-94278129
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:94146662..94149106-chr1:94275928..94279554,4	MCF-7	breast:
2	chr1:94093897..94096295-chr1:94277751..94279857,3	MCF-7	breast:
3	chr1:94146643..94149409-chr1:94276998..94280390,3	MCF-7	breast:
4	chr1:94137739..94141828-chr1:94278104..94280351,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000137936	Chromatin interaction

Extended variants
information (count: 274 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:268)

rs_ID	r²[population]
rs10158125	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10158155	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10158448	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10158745	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10443194	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10489601	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10874811	0.87[JPT][hapmap]
rs11164975	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11164976	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11164977	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164979	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11164980	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164981	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164982	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164983	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164984	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164985	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164986	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164987	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164988	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164989	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164990	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164991	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164992	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164995	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11164997	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11164998	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11164999	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11165000	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11165003	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165004	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165005	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11165006	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165009	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165014	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11165015	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165017	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11165031	0.93[JPT][hapmap]
rs11800779	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11804184	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11808807	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12116529	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12116907	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12117504	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12117532	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12119101	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12119150	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12119418	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12119582	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12121376	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12121389	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12121513	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12122176	1.00[JPT][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12122531	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12122571	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12122871	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12123641	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12123667	0.98[ASN][1000 genomes]
rs12124077	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12124433	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12125068	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12126015	1.00[EUR][1000 genomes]
rs12126315	0.94[EUR][1000 genomes]
rs12126518	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12126805	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12128184	0.94[EUR][1000 genomes]
rs12128215	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12128353	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes]
rs12128463	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12129080	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes]
rs12130017	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12130369	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12130680	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12131163	0.80[EUR][1000 genomes]
rs12131932	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12132025	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12132181	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12132405	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes]
rs12132569	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12132625	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12133653	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12133741	0.87[EUR][1000 genomes]
rs12134159	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12135187	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12137698	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12138816	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12139144	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12139153	0.94[EUR][1000 genomes]
rs12139541	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12139561	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12139877	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12139968	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.94[EUR][1000 genomes]
rs12140014	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12140344	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12140496	1.00[EUR][1000 genomes]
rs12141014	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12141049	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12141212	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12141335	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12141697	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142097	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142384	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12143127	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12143397	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12143845	0.91[EUR][1000 genomes]
rs12143888	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12143950	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12144059	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12144131	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12144135	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12144176	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12144277	1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12145046	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12240145	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12402433	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12402802	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12402983	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12404613	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12404896	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12404925	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12405302	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes]
rs12405560	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12405984	0.92[EUR][1000 genomes]
rs12406037	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12406729	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12406885	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12407244	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12407550	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12407732	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12407917	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12407922	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408089	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12408109	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12408194	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12408402	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408537	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408575	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12408629	0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12408650	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408797	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12409459	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12409471	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12410084	0.94[EUR][1000 genomes]
rs12410101	0.94[EUR][1000 genomes]
rs12410106	0.94[EUR][1000 genomes]
rs12410342	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12410692	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12410985	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12410986	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12411043	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12411056	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12725087	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes]
rs12745866	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.94[EUR][1000 genomes]
rs12745888	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes]
rs17100392	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17110404	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110411	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110423	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110458	0.81[ASN][1000 genomes]
rs17110469	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110493	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17110498	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17110526	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17110535	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17110544	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1848	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1851	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1852	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1980084	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[EUR][1000 genomes]
rs1985243	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2092697	0.80[EUR][1000 genomes]
rs2143996	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2143997	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2391286	0.89[EUR][1000 genomes]
rs2391313	0.86[CHB][hapmap]
rs2391324	0.93[JPT][hapmap]
rs28743165	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34028800	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34761423	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35674584	0.80[EUR][1000 genomes]
rs3761915	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3827715	0.93[JPT][hapmap]
rs3935320	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3935334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4075343	0.87[CHB][hapmap]
rs4281327	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4348734	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4354545	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4357541	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4394664	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4468172	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4488046	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55897737	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56339503	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56670109	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56797450	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56872721	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56939682	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56981802	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57288295	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57397759	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57451717	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57553733	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57665774	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs57708386	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57787039	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57812682	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57962863	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs58880811	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59048850	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59873068	0.94[EUR][1000 genomes]
rs59972811	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59994448	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60299665	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60546652	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60661913	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60699147	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60807390	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61024563	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs61244553	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61581292	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61658150	0.94[EUR][1000 genomes]
rs6541395	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6664046	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6671880	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6672089	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6681001	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6684128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6684389	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6688926	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6688941	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6691888	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6692107	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6696758	0.87[JPT][hapmap]
rs717912	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs718875	0.93[JPT][hapmap]
rs74101503	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs74101510	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101512	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101544	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101547	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74101548	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74101551	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74101571	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs74101573	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101576	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101577	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101578	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101687	0.94[EUR][1000 genomes]
rs74101688	0.94[EUR][1000 genomes]
rs74101698	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs74101702	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74104105	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74104130	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74104131	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7515209	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7532168	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7540800	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7544883	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7546315	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7548162	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7550590	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7552104	0.86[CHB][hapmap]
rs7553438	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs765920	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs769211	0.93[JPT][hapmap]
rs960625	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs960626	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv546822	chr1:94246577-94289863	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv1815663	chr1:94246577-94291252	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1877	chr1:94247756-94292908	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv508415	chr1:94256122-94305339	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	esv1802380	chr1:94272119-94291252	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	esv1822452	chr1:94278128-94320233	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	121 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94271000-94279200	Weak transcription	Adipose Nuclei	Adipose
2	chr1:94271200-94278200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:94273600-94278600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:94273600-94282800	Weak transcription	Lung	lung
5	chr1:94274200-94278200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr1:94274800-94279400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr1:94275400-94279600	Enhancers	NHDF-Ad	bronchial
8	chr1:94275400-94280200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr1:94275400-94281400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr1:94275800-94280200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr1:94275800-94282400	Enhancers	Muscle Satellite Cultured Cells	--
12	chr1:94275800-94284200	Enhancers	Hela-S3	cervix
13	chr1:94275800-94285000	Enhancers	HMEC	breast
14	chr1:94276000-94278200	Enhancers	Right Atrium	heart
15	chr1:94276000-94278600	Enhancers	Fetal Lung	lung
16	chr1:94276000-94281400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr1:94276000-94283600	Enhancers	HSMM	muscle
18	chr1:94276000-94285200	Enhancers	Placenta	Placenta
19	chr1:94276400-94278600	Weak transcription	NHLF	lung
20	chr1:94276600-94278200	Enhancers	Fetal Muscle Leg	muscle
21	chr1:94276600-94278200	Enhancers	Right Ventricle	heart
22	chr1:94276600-94278800	Enhancers	Left Ventricle	heart
23	chr1:94276800-94283800	Enhancers	NHEK	skin
24	chr1:94277000-94278200	Enhancers	Fetal Brain Male	brain
25	chr1:94277000-94278200	Enhancers	Rectal Smooth Muscle	rectum
26	chr1:94277000-94282400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr1:94277000-94284400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr1:94277000-94285000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr1:94277200-94278600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr1:94277200-94280000	Weak transcription	Fetal Brain Female	brain
31	chr1:94277200-94282600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr1:94277400-94278600	Weak transcription	Osteobl	bone
33	chr1:94277400-94278800	Weak transcription	Placenta Amnion	Placenta Amnion
34	chr1:94277400-94278800	Weak transcription	HSMMtube	muscle
35	chr1:94277400-94278800	Weak transcription	NH-A	brain
36	chr1:94277400-94279400	Weak transcription	HUES6 Cell Line	embryonic stem cell
37	chr1:94277600-94278600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr1:94277600-94278600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr1:94277600-94279400	Weak transcription	HUVEC	blood vessel
40	chr1:94277600-94284600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr1:94277800-94278200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr1:94277800-94279600	Weak transcription	Fetal Kidney	kidney
43	chr1:94277800-94282600	Weak transcription	Fetal Stomach	stomach
44	chr1:94278000-94278200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr1:94278000-94278200	Enhancers	Skeletal Muscle Male	skeletal muscle
46	chr1:94278000-94279200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr1:94278000-94279800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr1:94278000-94279800	Enhancers	HepG2	liver
49	chr1:94278000-94280000	Enhancers	Skeletal Muscle Female	skeletal muscle

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