The 2.0 version of rSNPBase

Variant report

Variant rs11166184
Chromosome Location chr1:92579500-92579501
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92552200-92580400 Weak transcription Aorta Aorta
2 chr1:92552200-92583800 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr1:92552400-92586000 Weak transcription Rectal Smooth Muscle rectum
4 chr1:92552400-92595200 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:92552600-92582400 Weak transcription Duodenum Mucosa Duodenum
6 chr1:92552600-92590000 Weak transcription Brain Angular Gyrus brain
7 chr1:92552600-92591600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:92552600-92613400 Weak transcription Stomach Smooth Muscle stomach
9 chr1:92552800-92613600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:92554400-92583200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:92555200-92580400 Weak transcription Fetal Intestine Small intestine
12 chr1:92555200-92620400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:92555400-92580400 Weak transcription Ovary ovary
14 chr1:92556000-92613600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:92556600-92613400 Weak transcription Fetal Brain Female brain
16 chr1:92557400-92598000 Weak transcription Spleen Spleen
17 chr1:92558000-92583000 Weak transcription Primary hematopoietic stem cells blood
18 chr1:92558000-92604000 Weak transcription Left Ventricle heart
19 chr1:92560000-92613600 Weak transcription Brain Anterior Caudate brain
20 chr1:92560400-92580400 Weak transcription Lung lung
21 chr1:92560600-92590800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:92561200-92619600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:92561600-92590000 Weak transcription Brain Substantia Nigra brain
24 chr1:92562600-92582800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr1:92565600-92583000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:92567200-92624200 Weak transcription Fetal Stomach stomach
27 chr1:92567400-92618000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr1:92567600-92580400 Weak transcription Pancreas Pancrea
29 chr1:92567600-92581600 Weak transcription Fetal Muscle Trunk muscle
30 chr1:92568000-92583200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:92568200-92616400 Weak transcription Colon Smooth Muscle Colon
32 chr1:92569400-92595600 Weak transcription Brain Germinal Matrix brain
33 chr1:92569600-92583000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:92569800-92613600 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:92570000-92619600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:92570400-92589400 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:92570800-92594800 Weak transcription Fetal Intestine Large intestine
38 chr1:92571800-92601600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:92571800-92613400 Weak transcription Dnd41 blood
40 chr1:92572000-92613400 Weak transcription Brain Hippocampus Middle brain
41 chr1:92573200-92580600 Weak transcription Liver Liver
42 chr1:92573800-92580600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:92574000-92613400 Weak transcription Fetal Lung lung
44 chr1:92576200-92583000 Weak transcription Primary T cells from cord blood blood
45 chr1:92576200-92595800 Weak transcription Adipose Nuclei Adipose
46 chr1:92578600-92581600 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015