The 2.0 version of rSNPBase

Variant report

Variant rs11169023
Chromosome Location chr12:49839333-49839334
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49764200-49840200 Weak transcription Fetal Lung lung
2 chr12:49798400-49856000 Weak transcription Primary T cells from cord blood blood
3 chr12:49798600-49840000 Weak transcription Hela-S3 cervix
4 chr12:49812600-49849000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr12:49816000-49848800 Weak transcription Fetal Kidney kidney
6 chr12:49820400-49854400 Weak transcription Dnd41 blood
7 chr12:49822800-49842600 Weak transcription NHLF lung
8 chr12:49823000-49840200 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr12:49823000-49840200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr12:49823000-49854200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr12:49823000-49856000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr12:49823000-49915800 Weak transcription Primary B cells from cord blood blood
13 chr12:49823200-49856000 Weak transcription NHEK skin
14 chr12:49823200-49856400 Weak transcription HSMM muscle
15 chr12:49823400-49840000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr12:49823400-49854400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:49823400-49856000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr12:49823400-49857400 Weak transcription Muscle Satellite Cultured Cells --
19 chr12:49823400-49876000 Weak transcription Osteobl bone
20 chr12:49825800-49839400 Weak transcription Fetal Stomach stomach
21 chr12:49828000-49863400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr12:49829400-49855000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr12:49831200-49849000 Weak transcription NH-A brain
24 chr12:49831600-49852000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:49832400-49839800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr12:49833000-49849200 Weak transcription Fetal Intestine Large intestine
27 chr12:49833000-49849800 Weak transcription K562 blood
28 chr12:49833400-49848600 Weak transcription Psoas Muscle Psoas
29 chr12:49833600-49849800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr12:49833600-49854600 Weak transcription Duodenum Mucosa Duodenum
31 chr12:49834000-49840000 Weak transcription A549 lung
32 chr12:49834000-49849400 Weak transcription Left Ventricle heart
33 chr12:49834200-49839400 Weak transcription Fetal Intestine Small intestine
34 chr12:49834200-49840200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr12:49834200-49847400 Weak transcription HepG2 liver
36 chr12:49836000-49840000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:49836400-49839800 Weak transcription GM12878-XiMat blood
38 chr12:49837000-49839400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr12:49837000-49840200 Weak transcription HUVEC blood vessel
40 chr12:49837200-49840000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr12:49837600-49856000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr12:49838000-49840000 Weak transcription Fetal Muscle Leg muscle
43 chr12:49838600-49839600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr12:49838600-49840000 Weak transcription Fetal Muscle Trunk muscle
45 chr12:49839200-49876000 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015