Variant report
| Variant | rs11176784 |
|---|---|
| Chromosome Location | chr12:67963656-67963657 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:42)
| rs_ID | r2[population] |
|---|---|
| rs10128823 | 1.00[EUR][1000 genomes] |
| rs10129028 | 1.00[EUR][1000 genomes] |
| rs11176715 | 1.00[EUR][1000 genomes] |
| rs11176740 | 1.00[EUR][1000 genomes] |
| rs12297966 | 1.00[EUR][1000 genomes] |
| rs12300582 | 1.00[EUR][1000 genomes] |
| rs12303089 | 1.00[EUR][1000 genomes] |
| rs12306375 | 1.00[EUR][1000 genomes] |
| rs12307363 | 1.00[EUR][1000 genomes] |
| rs12307464 | 1.00[EUR][1000 genomes] |
| rs12309271 | 1.00[EUR][1000 genomes] |
| rs12311491 | 1.00[EUR][1000 genomes] |
| rs12311797 | 1.00[EUR][1000 genomes] |
| rs12311840 | 1.00[EUR][1000 genomes] |
| rs12311845 | 1.00[EUR][1000 genomes] |
| rs12312040 | 1.00[EUR][1000 genomes] |
| rs12314503 | 1.00[EUR][1000 genomes] |
| rs12318518 | 1.00[EUR][1000 genomes] |
| rs12318591 | 1.00[EUR][1000 genomes] |
| rs12320566 | 1.00[EUR][1000 genomes] |
| rs12321292 | 1.00[EUR][1000 genomes] |
| rs17103772 | 1.00[EUR][1000 genomes] |
| rs17120707 | 1.00[EUR][1000 genomes] |
| rs17120710 | 1.00[EUR][1000 genomes] |
| rs4083304 | 1.00[EUR][1000 genomes] |
| rs57886620 | 1.00[EUR][1000 genomes] |
| rs58828387 | 1.00[EUR][1000 genomes] |
| rs61504642 | 1.00[EUR][1000 genomes] |
| rs6581751 | 1.00[EUR][1000 genomes] |
| rs7135195 | 1.00[EUR][1000 genomes] |
| rs7138362 | 1.00[EUR][1000 genomes] |
| rs7294827 | 1.00[EUR][1000 genomes] |
| rs7306853 | 1.00[EUR][1000 genomes] |
| rs7307643 | 1.00[EUR][1000 genomes] |
| rs7312079 | 1.00[EUR][1000 genomes] |
| rs73326445 | 1.00[EUR][1000 genomes] |
| rs73326448 | 1.00[EUR][1000 genomes] |
| rs73326466 | 1.00[EUR][1000 genomes] |
| rs7964763 | 1.00[EUR][1000 genomes] |
| rs7977574 | 1.00[EUR][1000 genomes] |
| rs9989007 | 1.00[EUR][1000 genomes] |
| rs9989023 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3430007 | chr12:67947726-68241938 | Enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 9 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:67960400-67965200 | Weak transcription | Psoas Muscle | Psoas |
