The 2.0 version of rSNPBase

Variant report

Variant rs111900201
Chromosome Location chr15:56173986-56173987
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56148200-56174400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:56149000-56177600 Weak transcription Spleen Spleen
3 chr15:56152800-56174600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr15:56153000-56174000 Weak transcription Primary hematopoietic stem cells blood
5 chr15:56153000-56174400 Weak transcription HSMMtube muscle
6 chr15:56153000-56174800 Weak transcription Fetal Intestine Small intestine
7 chr15:56153000-56176400 Weak transcription Esophagus oesophagus
8 chr15:56153600-56178600 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr15:56155400-56174800 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr15:56155400-56175600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr15:56158200-56176400 Weak transcription Left Ventricle heart
12 chr15:56161200-56174400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr15:56161200-56179800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr15:56161400-56174400 Weak transcription NHEK skin
15 chr15:56161400-56174600 Weak transcription Primary T cells from cord blood blood
16 chr15:56161400-56177400 Weak transcription Duodenum Mucosa Duodenum
17 chr15:56161800-56174200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr15:56163400-56174600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr15:56163600-56174400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr15:56165200-56174200 Weak transcription Liver Liver
21 chr15:56165200-56174200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr15:56165600-56174800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr15:56166000-56174400 Weak transcription Muscle Satellite Cultured Cells --
24 chr15:56166000-56185400 Weak transcription Hela-S3 cervix
25 chr15:56167800-56176200 Weak transcription Psoas Muscle Psoas
26 chr15:56170200-56174400 Weak transcription HSMM muscle
27 chr15:56171400-56174400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr15:56171400-56177600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr15:56171600-56174600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr15:56171600-56175600 Weak transcription Aorta Aorta
31 chr15:56171800-56174000 Enhancers A549 lung
32 chr15:56171800-56176400 Weak transcription HUVEC blood vessel
33 chr15:56172000-56177200 Weak transcription Fetal Stomach stomach
34 chr15:56172000-56177600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr15:56172000-56186200 Weak transcription Osteobl bone
36 chr15:56172200-56174600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr15:56172800-56176400 Weak transcription Stomach Smooth Muscle stomach
38 chr15:56172800-56176800 Weak transcription Pancreas Pancrea
39 chr15:56172800-56189600 Weak transcription Placenta Placenta
40 chr15:56173200-56175600 Weak transcription Right Ventricle heart
41 chr15:56173400-56174800 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015