Variant report

Variant	rs112085502
Chromosome Location	chr1:225256676-225256677
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:29 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873225	chr1:225162060-225373936	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv549262	chr1:225191852-225319898	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv549263	chr1:225202426-225319898	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv998899	chr1:225210813-225496353	ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1004856	chr1:225228287-225271137	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv526708	chr1:225229866-225273248	ZNF genes & repeats Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv1808493	chr1:225232264-225267066	Weak transcription ZNF genes & repeats Enhancers Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv945671	chr1:225242969-225311101	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv3433442	chr1:225255829-225257827	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv2607015	chr1:225256150-225257762	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3438209	chr1:225256329-225257327	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv2297381	chr1:225256347-225257004	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3493046	chr1:225256395-225256930	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3321249	chr1:225256412-225256906	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3493049	chr1:225256426-225256959	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv7171	chr1:225256435-225256954	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3493047	chr1:225256437-225256899	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3321253	chr1:225256462-225256921	Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3321250	chr1:225256468-225256872	Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv4999	chr1:225256473-225256878	Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv3321252	chr1:225256479-225256849	Weak transcription	n/a	n/a	inside rSNPs	diseases
22	esv3493048	chr1:225256479-225256857	Weak transcription	n/a	n/a	inside rSNPs	diseases
23	esv3366759	chr1:225256499-225256827	Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv3321248	chr1:225256517-225256807	Weak transcription	n/a	n/a	inside rSNPs	diseases
25	esv3493050	chr1:225256528-225256818	Weak transcription	n/a	n/a	inside rSNPs	diseases
26	esv2511976	chr1:225256532-225256801	Weak transcription	n/a	n/a	inside rSNPs	diseases
27	esv3493052	chr1:225256532-225256816	Weak transcription	n/a	n/a	inside rSNPs	diseases
28	esv1621884	chr1:225256545-225256815	Weak transcription	n/a	n/a	inside rSNPs	diseases
29	esv3321254	chr1:225256546-225256843	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225255600-225260400	Weak transcription	Pancreas	Pancrea
2	chr1:225256400-225277400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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