Variant report

Variant	rs112146292
Chromosome Location	chr2:33682875-33682876
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr2:33682840-33683339	H1-neurons	neurons:	n/a	n/a
2	SPI1	chr2:33682630-33683287	HL-60	blood:	n/a	chr2:33682633-33682646
3	MEF2A	chr2:33682783-33683295	K562	blood:	n/a	chr2:33683069-33683080 chr2:33683068-33683083 chr2:33683067-33683083 chr2:33683064-33683085 chr2:33682920-33682941 chr2:33683067-33683082 chr2:33683064-33683085 chr2:33682920-33682941 chr2:33683067-33683082 chr2:33683067-33683082 chr2:33682919-33682936 chr2:33683068-33683082 chr2:33682902-33682919 chr2:33683070-33683081 chr2:33683066-33683087 chr2:33683071-33683080 chr2:33683068-33683084 chr2:33683066-33683087
4	CEBPB	chr2:33682871-33683216	HepG2	liver:	n/a	chr2:33683107-33683118 chr2:33683106-33683119
5	MEF2A	chr2:33682866-33683246	K562	blood:	n/a	chr2:33683069-33683080 chr2:33683068-33683083 chr2:33683067-33683083 chr2:33683064-33683085 chr2:33682920-33682941 chr2:33683067-33683082 chr2:33683064-33683085 chr2:33682920-33682941 chr2:33683067-33683082 chr2:33683067-33683082 chr2:33682919-33682936 chr2:33683068-33683082 chr2:33682902-33682919 chr2:33683070-33683081 chr2:33683066-33683087 chr2:33683071-33683080 chr2:33683068-33683084 chr2:33683066-33683087

Variant related genes	Relation type
RASGRP3	TF binding region

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1005435	chr2:33136117-33747159	Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv535624	chr2:33136117-33747159	Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
3	nsv873792	chr2:33682737-33715742	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:33668800-33685200	Weak transcription	HUVEC	blood vessel
2	chr2:33682000-33683400	Enhancers	Left Ventricle	heart
3	chr2:33682400-33683200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr2:33682400-33683200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr2:33682400-33685200	Enhancers	Liver	Liver
6	chr2:33682600-33683000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr2:33682600-33683200	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr2:33682600-33683200	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr2:33682600-33683400	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr2:33682600-33683800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
11	chr2:33682600-33683800	Enhancers	Adipose Nuclei	Adipose
12	chr2:33682600-33684000	Enhancers	Stomach Smooth Muscle	stomach
13	chr2:33682800-33683000	Flanking Active TSS	Primary hematopoietic stem cells	blood
14	chr2:33682800-33683000	Flanking Active TSS	Fetal Heart	heart
15	chr2:33682800-33683000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
16	chr2:33682800-33683000	Active TSS	Skeletal Muscle Female	skeletal muscle
17	chr2:33682800-33683200	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr2:33682800-33683200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr2:33682800-33683200	Enhancers	Colon Smooth Muscle	Colon
20	chr2:33682800-33683200	Enhancers	Duodenum Smooth Muscle	Duodenum
21	chr2:33682800-33683200	Enhancers	Rectal Smooth Muscle	rectum
22	chr2:33682800-33683400	Enhancers	Primary B cells from peripheral blood	blood
23	chr2:33682800-33683400	Enhancers	Fetal Intestine Small	intestine
24	chr2:33682800-33683800	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr2:33682800-33684000	Active TSS	Psoas Muscle	Psoas
26	chr2:33682800-33684000	Active TSS	Right Atrium	heart
27	chr2:33682800-33684000	Active TSS	Right Ventricle	heart
28	chr2:33682800-33685000	Enhancers	Fetal Stomach	stomach

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