Variant report

Variant rs11227960
Chromosome Location chr11:67559770-67559771
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67555800-67560000 Weak transcription Fetal Stomach stomach
2 chr11:67556000-67571800 Weak transcription Fetal Intestine Large intestine
3 chr11:67556000-67572400 Weak transcription Gastric stomach
4 chr11:67556000-67572400 Weak transcription Placenta Amnion Placenta Amnion
5 chr11:67556600-67563200 Weak transcription Fetal Intestine Small intestine
6 chr11:67557200-67572200 Weak transcription Thymus Thymus
7 chr11:67557400-67561000 Enhancers Fetal Muscle Leg muscle
8 chr11:67557600-67560400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr11:67557600-67561200 Enhancers Fetal Muscle Trunk muscle
10 chr11:67558000-67564000 Enhancers Fetal Thymus thymus
11 chr11:67558200-67572000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr11:67558200-67572400 Weak transcription Ovary ovary
13 chr11:67558400-67560000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr11:67558400-67560000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr11:67558800-67562000 Enhancers Dnd41 blood
16 chr11:67559200-67560000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr11:67559200-67560200 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr11:67559200-67561000 Enhancers HSMM muscle
19 chr11:67559400-67559800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
20 chr11:67559400-67559800 Enhancers HMEC breast
21 chr11:67559400-67560000 Enhancers Placenta Placenta
22 chr11:67559400-67560200 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr11:67559400-67560200 Enhancers H1 Cell Line embryonic stem cell
24 chr11:67559400-67560200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr11:67559400-67560200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr11:67559400-67560200 Enhancers H9 Cell Line embryonic stem cell
27 chr11:67559400-67560200 Enhancers HUES64 Cell Line embryonic stem cell
28 chr11:67559400-67560200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr11:67559400-67560200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr11:67559400-67560200 Enhancers Primary T cells fromperipheralblood blood
31 chr11:67559400-67560200 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr11:67559400-67560200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr11:67559400-67560200 Enhancers Rectal Mucosa Donor 31 rectum
34 chr11:67559400-67560200 Enhancers HepG2 liver
35 chr11:67559400-67560200 Enhancers NHEK skin
36 chr11:67559400-67560400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
37 chr11:67559400-67560400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr11:67559400-67560400 Enhancers Primary T helper 17 cells PMA-I stimulated --
39 chr11:67559600-67559800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
40 chr11:67559600-67560000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr11:67559600-67560200 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr11:67559600-67572000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr11:67559600-67572000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:67559600-67572200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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