The 2.0 version of rSNPBase
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Variant report
Variant
rs11236746
Chromosome Location
chr11:76128490-76128491
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:3)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:3 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr11:76128297..76130000-chr11:76134830..76136691,2
K562
blood:
2
chr11:76118708..76120776-chr11:76127034..76129111,2
MCF-7
breast:
3
chr11:76092017..76093553-chr11:76126814..76128807,2
MCF-7
breast:
No data
No data
No data
Variant related genes
Relation type
ENSG00000179240
Chromatin interaction
Extended variants information (count: 4 )
Associated traits (count: 1 )
rSNPs within LD-proxies of this variant (count:4)
rs_ID
r
2
[population]
rs10899221
1.00[ASW][hapmap]
rs11236723
1.00[ASW][hapmap]
rs35836875
0.81[EUR][1000 genomes]
rs56286820
0.82[EUR][1000 genomes]
mRNA abundance (count:1)
SNP
Gene
Cis/trans
Tissue
Source
rs11236746
FOLR3
cis
parietal
SCAN
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links