Variant report

Variant	rs11236927
Chromosome Location	chr11:76474230-76474231
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76463120..76464705-chr11:76473481..76475245,2	K562	blood:
2	chr11:76471872..76474464-chr11:76492818..76494960,2	K562	blood:

Variant related genes	Relation type
ENSG00000182704	Chromatin interaction
ENSG00000255100	Chromatin interaction

rs_ID	r²[population]
rs10899284	0.92[EUR][1000 genomes]
rs10899285	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10899286	0.92[EUR][1000 genomes]
rs11236938	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs11236939	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs11236940	0.92[EUR][1000 genomes]
rs11236941	0.92[EUR][1000 genomes]
rs11236942	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs61302956	0.92[EUR][1000 genomes]

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76457000-76474600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr11:76467800-76478400	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr11:76468000-76474400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr11:76468800-76474400	Weak transcription	HSMMtube	muscle
5	chr11:76470000-76475000	Weak transcription	Fetal Brain Female	brain
6	chr11:76470200-76474800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr11:76470200-76479000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr11:76470400-76474400	Weak transcription	Placenta	Placenta
9	chr11:76470400-76475000	Weak transcription	Fetal Brain Male	brain
10	chr11:76470600-76482000	Weak transcription	Psoas Muscle	Psoas
11	chr11:76471000-76475000	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr11:76471600-76474800	Weak transcription	K562	blood
13	chr11:76471600-76475000	Weak transcription	Fetal Heart	heart
14	chr11:76472200-76474400	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr11:76472200-76477200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr11:76472600-76474400	Enhancers	Liver	Liver
17	chr11:76473000-76474800	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr11:76473000-76478600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr11:76473200-76475000	Enhancers	A549	lung
20	chr11:76473400-76474400	Weak transcription	Fetal Muscle Leg	muscle
21	chr11:76473400-76475000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr11:76473600-76474400	Enhancers	NHEK	skin
23	chr11:76473600-76483200	Enhancers	Esophagus	oesophagus
24	chr11:76473800-76474400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr11:76473800-76475200	Enhancers	Duodenum Smooth Muscle	Duodenum
26	chr11:76473800-76475400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr11:76473800-76475400	Enhancers	Small Intestine	intestine
28	chr11:76473800-76475600	Enhancers	Adipose Nuclei	Adipose
29	chr11:76473800-76479200	Enhancers	Breast Myoepithelial Primary Cells	Breast
30	chr11:76474000-76474400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr11:76474000-76475400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr11:76474000-76475400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr11:76474000-76475400	Enhancers	Skeletal Muscle Male	skeletal muscle
34	chr11:76474000-76475600	Enhancers	Stomach Mucosa	stomach
35	chr11:76474000-76475800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr11:76474000-76475800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr11:76474000-76475800	Enhancers	Right Atrium	heart
38	chr11:76474000-76476000	Enhancers	HMEC	breast
39	chr11:76474000-76476000	Enhancers	HUVEC	blood vessel
40	chr11:76474000-76476200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr11:76474000-76476200	Enhancers	Lung	lung
42	chr11:76474000-76478800	Enhancers	Duodenum Mucosa	Duodenum
43	chr11:76474000-76481000	Enhancers	Fetal Muscle Trunk	muscle
44	chr11:76474000-76481200	Enhancers	Spleen	Spleen
45	chr11:76474000-76485600	Enhancers	Left Ventricle	heart
46	chr11:76474200-76474400	Bivalent Enhancer	Fetal Stomach	stomach
47	chr11:76474200-76474600	Enhancers	Osteobl	bone
48	chr11:76474200-76475200	Enhancers	Stomach Smooth Muscle	stomach
49	chr11:76474200-76475400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr11:76474200-76475400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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