Variant report

Variant	rs11238673
Chromosome Location	chr10:44227422-44227423
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44225581..44227703-chr10:44236879..44239030,2	MCF-7	breast:
2	chr10:44222418..44225154-chr10:44227350..44232031,4	K562	blood:

Variant related genes	Relation type
ENSG00000271173	Chromatin interaction
ENSG00000223746	Chromatin interaction

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10899858	1.00[ASN][1000 genomes]
rs10899859	1.00[ASN][1000 genomes]
rs10899881	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899885	1.00[ASN][1000 genomes]
rs11238591	1.00[ASN][1000 genomes]
rs11238605	1.00[ASN][1000 genomes]
rs11238628	1.00[ASN][1000 genomes]
rs11238635	1.00[ASN][1000 genomes]
rs11238638	1.00[ASN][1000 genomes]
rs11238645	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11238647	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11238674	1.00[ASN][1000 genomes]
rs11238675	1.00[ASN][1000 genomes]
rs11238677	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11238678	1.00[ASN][1000 genomes]
rs11238679	1.00[ASN][1000 genomes]
rs11238689	1.00[ASN][1000 genomes]
rs11238695	1.00[ASN][1000 genomes]
rs11238704	1.00[ASN][1000 genomes]
rs11238711	1.00[ASN][1000 genomes]
rs11591525	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11592645	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598020	1.00[ASN][1000 genomes]
rs12263722	1.00[ASN][1000 genomes]
rs12358200	1.00[ASN][1000 genomes]
rs1537799	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17154006	1.00[ASN][1000 genomes]
rs17154012	1.00[ASN][1000 genomes]
rs17154020	1.00[ASN][1000 genomes]
rs17447133	1.00[ASN][1000 genomes]
rs17447468	1.00[ASN][1000 genomes]
rs17447580	1.00[ASN][1000 genomes]
rs17463850	1.00[ASN][1000 genomes]
rs2005094	1.00[ASN][1000 genomes]
rs34966945	1.00[ASN][1000 genomes]
rs41313824	1.00[ASN][1000 genomes]
rs57740712	1.00[ASN][1000 genomes]
rs59220072	1.00[ASN][1000 genomes]
rs61859177	1.00[ASN][1000 genomes]
rs61859178	1.00[ASN][1000 genomes]
rs61859179	1.00[ASN][1000 genomes]
rs61859180	1.00[ASN][1000 genomes]
rs61859181	1.00[ASN][1000 genomes]
rs61859182	1.00[ASN][1000 genomes]
rs61859185	1.00[ASN][1000 genomes]
rs61859203	1.00[ASN][1000 genomes]
rs61859204	1.00[ASN][1000 genomes]
rs61859207	1.00[ASN][1000 genomes]
rs61859221	1.00[ASN][1000 genomes]
rs61859388	1.00[ASN][1000 genomes]
rs61859402	1.00[ASN][1000 genomes]
rs61861561	1.00[ASN][1000 genomes]
rs61861563	1.00[ASN][1000 genomes]
rs61861566	1.00[ASN][1000 genomes]
rs61861567	1.00[ASN][1000 genomes]
rs61861585	1.00[ASN][1000 genomes]
rs7903467	1.00[ASN][1000 genomes]
rs7903833	1.00[ASN][1000 genomes]
rs7906484	1.00[ASN][1000 genomes]
rs7913352	1.00[ASN][1000 genomes]
rs7916345	1.00[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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