The 2.0 version of rSNPBase

Variant report

Variant rs112998413
Chromosome Location chr1:67017834-67017835
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:67001200-67022000 Weak transcription Right Ventricle heart
4 chr1:67007000-67021800 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:67007200-67018000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:67008400-67018000 Weak transcription Lung lung
7 chr1:67009000-67019600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:67009600-67018200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:67009600-67019600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:67009800-67028200 Weak transcription Brain Germinal Matrix brain
11 chr1:67010000-67018600 Weak transcription Muscle Satellite Cultured Cells --
12 chr1:67010000-67018600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:67010000-67029000 Weak transcription Fetal Kidney kidney
14 chr1:67010800-67018600 Weak transcription Osteobl bone
15 chr1:67011000-67028000 Weak transcription HUVEC blood vessel
16 chr1:67011200-67021800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:67011200-67022000 Weak transcription Pancreas Pancrea
18 chr1:67011800-67029800 Weak transcription Fetal Brain Male brain
19 chr1:67012400-67018000 Weak transcription Fetal Lung lung
20 chr1:67012400-67021400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:67013000-67018000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:67013400-67018600 Weak transcription Brain Cingulate Gyrus brain
23 chr1:67013600-67018000 Weak transcription NHLF lung
24 chr1:67013800-67018000 Weak transcription Brain Substantia Nigra brain
25 chr1:67013800-67021200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:67014600-67018200 Weak transcription Brain Angular Gyrus brain
27 chr1:67015800-67021600 Weak transcription Brain Anterior Caudate brain
28 chr1:67016400-67018200 Weak transcription NH-A brain
29 chr1:67017400-67023800 Enhancers Fetal Heart heart
30 chr1:67017600-67018000 Enhancers Aorta Aorta
31 chr1:67017600-67019000 Enhancers Adipose Nuclei Adipose
32 chr1:67017600-67019800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:67017600-67020200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:67017800-67018000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:67017800-67018400 Enhancers Brain Hippocampus Middle brain
36 chr1:67017800-67018600 Enhancers NHDF-Ad bronchial
37 chr1:67017800-67018800 Enhancers Left Ventricle heart
38 chr1:67017800-67019000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:67017800-67019000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:67017800-67019000 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr1:67017800-67019200 Enhancers Fetal Thymus thymus
42 chr1:67017800-67022400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015