Variant report

Variant	rs11354212
Chromosome Location	chr5:97934541-97934542
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:97927404..97929282-chr5:97932064..97934664,2	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:39 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882412	chr5:97796120-97953719	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1016611	chr5:97873846-98035559	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	nsv537816	chr5:97873846-98035559	Enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
4	nsv1029509	chr5:97888644-98040172	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv882413	chr5:97918829-98022320	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv999288	chr5:97926959-97940484	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv2763884	chr5:97930840-97935770	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv508372	chr5:97931331-97948860	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3469591	chr5:97932997-97939963	Enhancers Strong transcription ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3469589	chr5:97933007-97939951	Strong transcription Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3469590	chr5:97933039-97939910	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3469592	chr5:97933039-97939910	ZNF genes & repeats Enhancers Strong transcription Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv823153	chr5:97933043-97935372	Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv17657	chr5:97933161-97939819	Strong transcription Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv1808514	chr5:97933671-97935503	ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv1826758	chr5:97933671-97935503	ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv1829322	chr5:97933671-97935503	ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv441957	chr5:97933671-97935503	Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv1827151	chr5:97933671-97935770	ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv599077	chr5:97933888-97936058	ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv599078	chr5:97933888-97937894	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv599079	chr5:97933888-97938220	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
23	nsv599080	chr5:97933888-97939283	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv1825264	chr5:97933888-97939616	Enhancers Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
25	esv1829763	chr5:97933888-97939616	Strong transcription Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv1831725	chr5:97933888-97939616	Enhancers Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
27	esv1827338	chr5:97934125-97935950	ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
28	esv1832516	chr5:97934125-97935950	ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
29	esv1831739	chr5:97934125-97936549	ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv1825624	chr5:97934125-97938220	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
31	esv1828696	chr5:97934125-97938220	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv1831312	chr5:97934125-97938220	Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
33	esv1825513	chr5:97934125-97939283	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv1829712	chr5:97934125-97939283	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
35	esv1832127	chr5:97934125-97939283	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
36	nsv599081	chr5:97934125-97939283	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
37	esv1832089	chr5:97934125-97976039	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
38	esv2201693	chr5:97934541-97934542	ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
39	nsv312145	chr5:97934542-97934542	ZNF genes & repeats	Chromatin interactive region	n/a	n/a	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:97933800-97939600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links