Variant report

Variant	rs113661735
Chromosome Location	chr15:76626803-76626804
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5)
CpG islands
(count:0)
Chromatin interactive
region (count:15)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:5 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr15:76626251-76626857	HepG2	liver:	n/a	n/a
2	RCOR1	chr15:76626178-76627069	K562	blood:	n/a	n/a
3	BCL3	chr15:76625999-76626831	A549	lung:	n/a	n/a
4	RCOR1	chr15:76626205-76627119	K562	blood:	n/a	n/a
5	RCOR1	chr15:76626716-76627255	IMR90	lung:	n/a	n/a

No data

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:76536052..76538600-chr15:76625414..76627527,2	MCF-7	breast:
2	chr15:76601310..76610583-chr15:76618699..76634643,40	K562	blood:
3	chr15:76591467..76593414-chr15:76626364..76628156,2	K562	blood:
4	chr15:76598820..76601362-chr15:76625646..76628540,2	K562	blood:
5	chr15:76624512..76627161-chr15:76627320..76629077,4	MCF-7	breast:
6	chr15:76600511..76607655-chr15:76613791..76629933,32	MCF-7	breast:
7	chr15:76602419..76607116-chr15:76626572..76631104,6	MCF-7	breast:
8	chr15:76597896..76600825-chr15:76626656..76628546,2	MCF-7	breast:
9	chr15:76601574..76614388-chr15:76623703..76634730,38	K562	blood:
10	chr15:76617028..76618858-chr15:76625946..76627693,2	MCF-7	breast:
11	chr15:76482924..76483751-chr15:76625816..76626899,5	MCF-7	breast:
12	chr15:76591467..76593995-chr15:76626637..76628156,2	K562	blood:
13	chr15:76488844..76490782-chr15:76625306..76628294,2	K562	blood:
14	chr15:76482740..76483457-chr15:76626133..76626814,2	MCF-7	breast:
15	chr15:76483216..76483808-chr15:76625887..76626857,3	K562	blood:

No data

No data

No data

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904399	chr15:76622903-76646575	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv827391	chr15:76626571-76636327	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:76621000-76628000	Weak transcription	HSMMtube	muscle
2	chr15:76625600-76627000	Enhancers	K562	blood
3	chr15:76626000-76627000	Enhancers	Hela-S3	cervix
4	chr15:76626000-76627200	Flanking Active TSS	HepG2	liver
5	chr15:76626400-76627400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr15:76626400-76627600	Strong transcription	Right Atrium	heart
7	chr15:76626600-76627600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr15:76626800-76627000	Enhancers	A549	lung
9	chr15:76626800-76627600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr15:76626800-76627600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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