Variant report

Variant	rs113954401
Chromosome Location	chr7:138304466-138304467
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030956	chr7:138163169-138579519	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	esv2543778	chr7:138304224-138305562	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:138293200-138308400	Weak transcription	Primary T cells from cord blood	blood
2	chr7:138297400-138307400	Weak transcription	Primary hematopoietic stem cells	blood
3	chr7:138297600-138318800	Weak transcription	Hela-S3	cervix
4	chr7:138303000-138304600	Enhancers	HepG2	liver
5	chr7:138303000-138306200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr7:138303200-138304800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr7:138303600-138306600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr7:138303800-138304800	Enhancers	Primary hematopoietic stem cells short term culture	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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