The 2.0 version of rSNPBase

Variant report

Variant rs11498892
Chromosome Location chr10:119110129-119110130
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:119063800-119113200 Weak transcription Fetal Thymus thymus
2 chr10:119066800-119111600 Weak transcription Colonic Mucosa Colon
3 chr10:119072000-119111200 Weak transcription Aorta Aorta
4 chr10:119082400-119118600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr10:119094000-119113200 Weak transcription Thymus Thymus
6 chr10:119095000-119113200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr10:119095600-119112200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr10:119095600-119113400 Weak transcription Brain Cingulate Gyrus brain
9 chr10:119096800-119112000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr10:119097000-119112000 Weak transcription Brain Anterior Caudate brain
11 chr10:119097000-119114600 Weak transcription Brain Hippocampus Middle brain
12 chr10:119099800-119114800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr10:119100000-119114800 Weak transcription Fetal Heart heart
14 chr10:119100200-119131000 Weak transcription Fetal Muscle Leg muscle
15 chr10:119101000-119112800 Weak transcription Dnd41 blood
16 chr10:119102200-119112800 Weak transcription Primary B cells from cord blood blood
17 chr10:119102400-119110600 Weak transcription Primary B cells from peripheral blood blood
18 chr10:119102400-119114600 Weak transcription Spleen Spleen
19 chr10:119102400-119131400 Weak transcription Psoas Muscle Psoas
20 chr10:119102600-119113400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr10:119102600-119113400 Weak transcription Brain Angular Gyrus brain
22 chr10:119102600-119119000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr10:119102800-119119600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr10:119102800-119123600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr10:119105000-119110400 Weak transcription GM12878-XiMat blood
26 chr10:119105000-119111200 Weak transcription Primary T cells fromperipheralblood blood
27 chr10:119105000-119115000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:119105000-119118400 Weak transcription Ovary ovary
29 chr10:119105000-119119600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr10:119105200-119110400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr10:119105200-119112000 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr10:119105200-119113400 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr10:119105400-119110400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr10:119105400-119110800 Weak transcription Liver Liver
35 chr10:119105400-119110800 Enhancers A549 lung
36 chr10:119105400-119111000 Weak transcription Primary T cells from cord blood blood
37 chr10:119105400-119111800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr10:119105400-119112000 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr10:119105400-119112200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr10:119105400-119113400 Weak transcription HepG2 liver
41 chr10:119106600-119111000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr10:119106600-119111000 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr10:119106800-119112200 Weak transcription Pancreas Pancrea
44 chr10:119107200-119116200 Weak transcription Fetal Intestine Small intestine
45 chr10:119107200-119131400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr10:119107600-119111400 Weak transcription Fetal Intestine Large intestine
47 chr10:119108000-119114000 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr10:119108200-119111600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr10:119108200-119114200 Enhancers Primary monocytes fromperipheralblood blood
50 chr10:119108400-119112200 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015