Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:59847145..59850103-chr11:59877853..59879913,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1151065	0.83[EUR][1000 genomes]
rs1151103	0.83[EUR][1000 genomes]
rs1151104	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1286162	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1286169	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1286170	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1286171	0.82[EUR][1000 genomes]
rs1296390	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3016834	0.82[EUR][1000 genomes]
rs3016835	0.83[AMR][1000 genomes]
rs471457	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs474951	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs501697	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs501945	0.85[EUR][1000 genomes]
rs525828	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs528823	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs536531	0.83[EUR][1000 genomes]
rs539360	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs543695	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs549651	0.85[EUR][1000 genomes]
rs549680	0.84[EUR][1000 genomes]
rs554311	0.83[EUR][1000 genomes]
rs558678	0.84[EUR][1000 genomes]
rs558788	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs579721	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832173	chr11:59788884-59940560	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv468579	chr11:59814287-59975400	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv555150	chr11:59814287-59975400	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv972036	chr11:59845745-59853677	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59847600-59852000	Weak transcription	K562	blood

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