The 2.0 version of rSNPBase

Variant report

Variant rs11576435
Chromosome Location chr1:94167564-94167565
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94153800-94171600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:94155600-94171000 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:94157400-94167600 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:94158400-94168200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr1:94159000-94173600 Weak transcription Fetal Intestine Small intestine
6 chr1:94159600-94173800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:94160600-94171000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:94161200-94168400 Weak transcription Fetal Kidney kidney
9 chr1:94161600-94173800 Weak transcription Primary hematopoietic stem cells blood
10 chr1:94162000-94167800 Weak transcription Adipose Nuclei Adipose
11 chr1:94163000-94171400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:94163600-94167600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:94163800-94171000 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:94164000-94170000 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:94164000-94170400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:94164000-94172200 Enhancers HMEC breast
17 chr1:94164800-94167600 Enhancers Muscle Satellite Cultured Cells --
18 chr1:94164800-94169000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:94164800-94172000 Enhancers Primary B cells from peripheral blood blood
20 chr1:94165000-94169800 Enhancers Placenta Placenta
21 chr1:94165200-94171200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:94165800-94168800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:94165800-94170200 Enhancers Placenta Amnion Placenta Amnion
24 chr1:94166000-94167600 Enhancers HSMM muscle
25 chr1:94166000-94168600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:94166000-94168600 Enhancers Esophagus oesophagus
27 chr1:94166000-94169600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:94166200-94167600 Enhancers Hela-S3 cervix
29 chr1:94166200-94168000 Enhancers Lung lung
30 chr1:94166200-94170200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:94166200-94170200 Enhancers NHDF-Ad bronchial
32 chr1:94166200-94170400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:94166400-94168600 Enhancers Fetal Lung lung
34 chr1:94166400-94168600 Enhancers NHLF lung
35 chr1:94166400-94170000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:94166400-94170200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:94166600-94168000 Enhancers Gastric stomach
38 chr1:94166600-94168200 Enhancers Right Ventricle heart
39 chr1:94166600-94168200 Enhancers Skeletal Muscle Female skeletal muscle
40 chr1:94166600-94168200 Enhancers GM12878-XiMat blood
41 chr1:94166600-94169800 Enhancers NH-A brain
42 chr1:94166600-94171200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:94166600-94171400 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:94166800-94168000 Enhancers HUVEC blood vessel
45 chr1:94166800-94168800 Enhancers HSMMtube muscle
46 chr1:94166800-94169000 Enhancers Psoas Muscle Psoas
47 chr1:94166800-94169400 Enhancers Left Ventricle heart
48 chr1:94167000-94167600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:94167000-94167600 Bivalent Enhancer Fetal Muscle Trunk muscle
50 chr1:94167000-94167600 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015