Variant report

Variant	rs11581752
Chromosome Location	chr1:220554892-220554893
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11118539	0.92[AFR][1000 genomes]
rs12043296	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12043297	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1338770	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17568324	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17568345	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2185157	0.96[CEU][hapmap];0.94[CHB][hapmap];0.86[JPT][hapmap]
rs4559509	0.91[AFR][1000 genomes]
rs61830869	0.93[AFR][1000 genomes]
rs6663859	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220552200-220556400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr1:220554200-220555000	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr1:220554400-220555000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr1:220554600-220556800	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr1:220554800-220556000	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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