Variant report

Variant	rs11582507
Chromosome Location	chr1:211191894-211191895
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:211079490..211081106-chr1:211190726..211193541,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10494931	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10494932	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10863874	0.81[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes]
rs11119658	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11119664	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11578692	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11579078	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11582440	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11583101	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11588573	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12074568	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12121565	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs12722738	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12750762	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12751504	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12752336	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12756697	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12760791	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1393026	0.81[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs1393028	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1501551	0.91[YRI][hapmap];0.85[AFR][1000 genomes]
rs1501558	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1501560	0.82[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1501566	0.81[CEU][hapmap];0.82[YRI][hapmap]
rs1501569	0.88[YRI][hapmap]
rs1538287	0.84[JPT][hapmap]
rs1539531	0.86[YRI][hapmap]
rs1572646	0.84[JPT][hapmap]
rs17017226	0.84[JPT][hapmap]
rs17188741	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17188748	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17188797	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1875435	0.83[YRI][hapmap]
rs1933524	0.84[JPT][hapmap]
rs2134108	0.86[ASN][1000 genomes]
rs2221250	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2358214	0.98[AFR][1000 genomes]
rs3111224	0.85[JPT][hapmap]
rs3120778	0.84[JPT][hapmap]
rs3125850	0.84[JPT][hapmap]
rs33985151	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34773128	0.86[ASN][1000 genomes]
rs34827659	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35019263	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3828021	0.84[JPT][hapmap]
rs4262610	0.94[ASN][1000 genomes]
rs4638187	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56260926	0.90[ASN][1000 genomes]
rs59374111	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61850226	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6540658	0.84[JPT][hapmap]
rs6669457	0.81[CEU][hapmap]
rs6669706	0.84[JPT][hapmap]
rs6678283	0.81[CEU][hapmap];1.00[YRI][hapmap]
rs6683856	0.86[ASN][1000 genomes]
rs6697578	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6702598	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7414286	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7517771	0.81[AFR][1000 genomes]
rs7519090	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7536519	0.81[CEU][hapmap]
rs867849	0.85[JPT][hapmap]
rs868963	0.85[CHB][hapmap];0.92[JPT][hapmap]
rs946142	0.85[JPT][hapmap]
rs9662051	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211181800-211193800	Weak transcription	Brain Anterior Caudate	brain
2	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:211184800-211198600	Weak transcription	Brain Hippocampus Middle	brain
4	chr1:211185200-211194000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr1:211187000-211198200	Weak transcription	Brain Angular Gyrus	brain
6	chr1:211187600-211198200	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr1:211189200-211193000	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr1:211190600-211192000	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr1:211190600-211198800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr1:211191000-211192400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr1:211191600-211192200	Weak transcription	Brain Cingulate Gyrus	brain
12	chr1:211191800-211192400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr1:211191800-211192400	Strong transcription	A549	lung
14	chr1:211191800-211192600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr1:211191800-211192600	Strong transcription	Brain Substantia Nigra	brain
16	chr1:211191800-211192600	Strong transcription	HSMMtube	muscle
17	chr1:211191800-211192800	Strong transcription	HSMM	muscle

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