The 2.0 version of rSNPBase

Variant report

Variant rs11586089
Chromosome Location chr1:93408279-93408280
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:93388200-93408800 Weak transcription Pancreas Pancrea
3 chr1:93391200-93408800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:93395400-93408800 Weak transcription Stomach Mucosa stomach
5 chr1:93395800-93408800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:93399200-93410200 Weak transcription Right Ventricle heart
7 chr1:93399600-93408800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:93400400-93408800 Weak transcription Psoas Muscle Psoas
9 chr1:93400400-93410200 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:93400400-93416600 Weak transcription Fetal Intestine Small intestine
11 chr1:93400600-93410400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:93400800-93408400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:93400800-93408800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:93400800-93421800 Weak transcription Fetal Lung lung
15 chr1:93401800-93409200 Weak transcription Fetal Thymus thymus
16 chr1:93402000-93408600 Weak transcription HepG2 liver
17 chr1:93402600-93410200 Weak transcription Adipose Nuclei Adipose
18 chr1:93403000-93408400 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:93403200-93408800 Weak transcription Primary T cells from cord blood blood
20 chr1:93403400-93409800 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr1:93403600-93408800 Weak transcription Duodenum Mucosa Duodenum
22 chr1:93404200-93408600 Weak transcription GM12878-XiMat blood
23 chr1:93404200-93408800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:93405800-93408800 Weak transcription Ovary ovary
25 chr1:93405800-93410200 Weak transcription Aorta Aorta
26 chr1:93405800-93412600 Enhancers Brain Anterior Caudate brain
27 chr1:93406000-93408600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:93406000-93408600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:93406200-93408400 Weak transcription Stomach Smooth Muscle stomach
30 chr1:93406200-93408600 Weak transcription Fetal Heart heart
31 chr1:93406200-93408800 Weak transcription Brain Angular Gyrus brain
32 chr1:93406200-93408800 Weak transcription Colon Smooth Muscle Colon
33 chr1:93406200-93415200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:93406600-93408600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:93406600-93408600 Weak transcription NHEK skin
36 chr1:93406600-93413200 Weak transcription HMEC breast
37 chr1:93407000-93409600 Enhancers Liver Liver
38 chr1:93407000-93409800 Enhancers Primary B cells from cord blood blood
39 chr1:93407000-93411600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr1:93407000-93412200 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr1:93407000-93412800 Enhancers Primary B cells from peripheral blood blood
42 chr1:93407200-93412200 Enhancers Brain Inferior Temporal Lobe brain
43 chr1:93407400-93409400 Enhancers Osteobl bone
44 chr1:93407600-93408600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr1:93407600-93408600 Weak transcription Brain Substantia Nigra brain
46 chr1:93407600-93408800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:93407600-93408800 Weak transcription Small Intestine intestine
48 chr1:93407600-93409200 Enhancers Fetal Brain Female brain
49 chr1:93407600-93415400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:93407800-93408400 Weak transcription NHDF-Ad bronchial

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015