Variant report
| Variant | rs11592645 |
|---|---|
| Chromosome Location | chr10:44225779-44225780 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:1)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:1 , 50 per page) page:
1
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:44225581..44227703-chr10:44236879..44239030,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| UQCRHP3 | TF binding region |
| ENSG00000223746 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:61)
| rs_ID | r2[population] |
|---|---|
| rs10899858 | 1.00[ASN][1000 genomes] |
| rs10899859 | 1.00[ASN][1000 genomes] |
| rs10899881 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10899885 | 1.00[ASN][1000 genomes] |
| rs11238591 | 1.00[ASN][1000 genomes] |
| rs11238605 | 1.00[ASN][1000 genomes] |
| rs11238628 | 1.00[ASN][1000 genomes] |
| rs11238635 | 1.00[ASN][1000 genomes] |
| rs11238638 | 1.00[ASN][1000 genomes] |
| rs11238645 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11238647 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11238673 | 0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11238674 | 1.00[ASN][1000 genomes] |
| rs11238675 | 1.00[ASN][1000 genomes] |
| rs11238677 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11238678 | 1.00[ASN][1000 genomes] |
| rs11238679 | 1.00[ASN][1000 genomes] |
| rs11238689 | 1.00[ASN][1000 genomes] |
| rs11238695 | 1.00[ASN][1000 genomes] |
| rs11238704 | 1.00[ASN][1000 genomes] |
| rs11238711 | 1.00[ASN][1000 genomes] |
| rs11591525 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11598020 | 1.00[ASN][1000 genomes] |
| rs12263722 | 1.00[ASN][1000 genomes] |
| rs12358200 | 1.00[ASN][1000 genomes] |
| rs1537799 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs17154006 | 1.00[ASN][1000 genomes] |
| rs17154012 | 1.00[ASN][1000 genomes] |
| rs17154020 | 1.00[ASN][1000 genomes] |
| rs17447133 | 1.00[ASN][1000 genomes] |
| rs17447468 | 1.00[ASN][1000 genomes] |
| rs17447580 | 1.00[ASN][1000 genomes] |
| rs17463850 | 1.00[ASN][1000 genomes] |
| rs2005094 | 1.00[ASN][1000 genomes] |
| rs34966945 | 1.00[ASN][1000 genomes] |
| rs41313824 | 1.00[ASN][1000 genomes] |
| rs57740712 | 1.00[ASN][1000 genomes] |
| rs59220072 | 1.00[ASN][1000 genomes] |
| rs61859177 | 1.00[ASN][1000 genomes] |
| rs61859178 | 1.00[ASN][1000 genomes] |
| rs61859179 | 1.00[ASN][1000 genomes] |
| rs61859180 | 1.00[ASN][1000 genomes] |
| rs61859181 | 1.00[ASN][1000 genomes] |
| rs61859182 | 1.00[ASN][1000 genomes] |
| rs61859185 | 1.00[ASN][1000 genomes] |
| rs61859203 | 1.00[ASN][1000 genomes] |
| rs61859204 | 1.00[ASN][1000 genomes] |
| rs61859207 | 1.00[ASN][1000 genomes] |
| rs61859221 | 1.00[ASN][1000 genomes] |
| rs61859388 | 1.00[ASN][1000 genomes] |
| rs61859402 | 1.00[ASN][1000 genomes] |
| rs61861561 | 1.00[ASN][1000 genomes] |
| rs61861563 | 1.00[ASN][1000 genomes] |
| rs61861566 | 1.00[ASN][1000 genomes] |
| rs61861567 | 1.00[ASN][1000 genomes] |
| rs61861585 | 1.00[ASN][1000 genomes] |
| rs7903467 | 1.00[ASN][1000 genomes] |
| rs7903833 | 1.00[ASN][1000 genomes] |
| rs7906484 | 1.00[ASN][1000 genomes] |
| rs7913352 | 1.00[ASN][1000 genomes] |
| rs7916345 | 1.00[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
