The 2.0 version of rSNPBase

Variant report

Variant rs115994412
Chromosome Location chr10:119043266-119043267
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:119020600-119045400 Weak transcription Fetal Heart heart
2 chr10:119031800-119043800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr10:119032000-119044000 Weak transcription Aorta Aorta
4 chr10:119032000-119050600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr10:119032400-119043800 Weak transcription Esophagus oesophagus
6 chr10:119032400-119051000 Weak transcription Ovary ovary
7 chr10:119032600-119046200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr10:119032600-119063200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr10:119035200-119043800 Weak transcription Rectal Smooth Muscle rectum
10 chr10:119035400-119058000 Weak transcription Small Intestine intestine
11 chr10:119035800-119043800 Weak transcription Lung lung
12 chr10:119036600-119044200 Weak transcription HSMMtube muscle
13 chr10:119037200-119044000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr10:119037800-119043400 Weak transcription Primary B cells from peripheral blood blood
15 chr10:119038800-119043400 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr10:119038800-119050000 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr10:119039200-119043400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr10:119039800-119044200 Weak transcription Hela-S3 cervix
19 chr10:119040200-119043400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr10:119040400-119050200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr10:119040800-119050600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr10:119041000-119050000 Strong transcription Primary neutrophils fromperipheralblood blood
23 chr10:119041200-119045600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr10:119041200-119050000 Strong transcription Liver Liver
25 chr10:119041200-119051000 Weak transcription Right Ventricle heart
26 chr10:119041400-119101200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr10:119041600-119043400 Weak transcription Fetal Brain Male brain
28 chr10:119041600-119046200 Strong transcription Primary monocytes fromperipheralblood blood
29 chr10:119041800-119043400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr10:119041800-119043400 Weak transcription Fetal Brain Female brain
31 chr10:119041800-119071600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr10:119042000-119043600 Weak transcription NHDF-Ad bronchial
33 chr10:119042000-119050000 Strong transcription Fetal Intestine Large intestine
34 chr10:119042000-119053200 Weak transcription Colonic Mucosa Colon
35 chr10:119042200-119044200 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr10:119042200-119044800 Strong transcription NH-A brain
37 chr10:119042200-119046400 Strong transcription Duodenum Mucosa Duodenum
38 chr10:119042200-119064200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr10:119042400-119044000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr10:119042600-119043400 Enhancers Brain Substantia Nigra brain
41 chr10:119042600-119043600 Enhancers Brain Inferior Temporal Lobe brain
42 chr10:119042600-119044000 Enhancers Thymus Thymus
43 chr10:119042600-119044200 Weak transcription NHLF lung
44 chr10:119042600-119045000 Strong transcription H1 Cell Line embryonic stem cell
45 chr10:119042600-119045000 Strong transcription iPS-18 Cell Line embryonic stem cell
46 chr10:119042600-119045000 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr10:119042600-119045000 Strong transcription Fetal Lung lung
48 chr10:119042600-119045400 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr10:119042600-119045400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr10:119042600-119045400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015