The 2.0 version of rSNPBase

Variant report

Variant rs11615488
Chromosome Location chr12:50087630-50087631
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50078000-50091000 Weak transcription Rectal Smooth Muscle rectum
2 chr12:50078600-50090600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr12:50078600-50092200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr12:50078800-50088200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr12:50078800-50088200 Weak transcription HSMM muscle
6 chr12:50078800-50091800 Weak transcription NH-A brain
7 chr12:50078800-50092400 Weak transcription NHLF lung
8 chr12:50079000-50088000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr12:50079000-50088000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr12:50079000-50092000 Weak transcription Small Intestine intestine
11 chr12:50079000-50096200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr12:50079200-50090600 Weak transcription Ovary ovary
13 chr12:50079200-50091000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr12:50079200-50092400 Weak transcription Fetal Stomach stomach
15 chr12:50079200-50092800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr12:50079400-50088000 Weak transcription HSMMtube muscle
17 chr12:50079400-50090600 Weak transcription Psoas Muscle Psoas
18 chr12:50080800-50092800 Weak transcription Fetal Muscle Trunk muscle
19 chr12:50082000-50088000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr12:50082000-50088200 Weak transcription Osteobl bone
21 chr12:50082000-50092800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr12:50082200-50090000 Weak transcription Left Ventricle heart
23 chr12:50082200-50092000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr12:50082200-50092800 Weak transcription Aorta Aorta
25 chr12:50083400-50092800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr12:50083600-50089200 Weak transcription Brain Cingulate Gyrus brain
27 chr12:50083600-50092800 Weak transcription Lung lung
28 chr12:50083800-50087800 Weak transcription Brain Hippocampus Middle brain
29 chr12:50083800-50088000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr12:50083800-50090600 Weak transcription H9 Cell Line embryonic stem cell
31 chr12:50083800-50090800 Weak transcription Brain Substantia Nigra brain
32 chr12:50083800-50092400 Weak transcription Duodenum Mucosa Duodenum
33 chr12:50084000-50088000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr12:50084200-50090000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr12:50084400-50088000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr12:50084800-50091000 Weak transcription Right Atrium heart
37 chr12:50084800-50091800 Weak transcription K562 blood
38 chr12:50084800-50092000 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr12:50085000-50091000 Weak transcription Primary B cells from cord blood blood
40 chr12:50085000-50092000 Weak transcription Fetal Thymus thymus
41 chr12:50085000-50092000 Weak transcription Dnd41 blood
42 chr12:50085000-50092600 Weak transcription Stomach Mucosa stomach
43 chr12:50085200-50089200 Weak transcription Primary T cells from cord blood blood
44 chr12:50085200-50089200 Weak transcription Fetal Lung lung
45 chr12:50085200-50092000 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr12:50085400-50089600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr12:50085400-50090000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr12:50085400-50090400 Weak transcription GM12878-XiMat blood
49 chr12:50085400-50090600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr12:50085400-50091200 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015