Variant report

Variant	rs116440547
Chromosome Location	chr8:126179939-126179940
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:126165364..126171538-chr8:126175409..126180027,9	MCF-7	breast:
2	chr8:126178763..126181013-chr8:126182364..126184931,3	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv949614	chr8:126063646-126376699	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	nsv917158	chr8:126101990-126255266	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	19 gene(s)	inside rSNPs	diseases
4	nsv1022954	chr8:126117811-126180331	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
5	nsv1034798	chr8:126179383-126241525	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126118000-126191800	Weak transcription	Thymus	Thymus
2	chr8:126137600-126213600	Weak transcription	Fetal Stomach	stomach
3	chr8:126138000-126191000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr8:126138000-126197800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr8:126138200-126200400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:126138400-126200200	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr8:126142600-126231400	Weak transcription	Stomach Smooth Muscle	stomach
8	chr8:126143000-126193200	Weak transcription	Left Ventricle	heart
9	chr8:126143200-126180600	Weak transcription	Fetal Muscle Leg	muscle
10	chr8:126143200-126186800	Weak transcription	Adipose Nuclei	Adipose
11	chr8:126156600-126180600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:126156600-126185400	Weak transcription	Lung	lung
13	chr8:126156600-126199800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr8:126157400-126186400	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr8:126158200-126186600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr8:126158600-126180600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr8:126158600-126185400	Weak transcription	Placenta	Placenta
18	chr8:126160600-126180400	Weak transcription	HUVEC	blood vessel
19	chr8:126160600-126181800	Weak transcription	Right Atrium	heart
20	chr8:126160600-126185400	Weak transcription	Aorta	Aorta
21	chr8:126160600-126187400	Weak transcription	Gastric	stomach
22	chr8:126162200-126186600	Weak transcription	Colon Smooth Muscle	Colon
23	chr8:126162600-126183000	Weak transcription	Psoas Muscle	Psoas
24	chr8:126163200-126180600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr8:126163200-126193200	Weak transcription	Ovary	ovary
26	chr8:126163600-126180600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
27	chr8:126164000-126181800	Weak transcription	Fetal Lung	lung
28	chr8:126164200-126185200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr8:126164200-126185400	Weak transcription	HSMMtube	muscle
30	chr8:126164400-126180400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr8:126164400-126181400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr8:126164400-126186000	Weak transcription	NH-A	brain
33	chr8:126164600-126180800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr8:126164600-126186000	Weak transcription	HSMM	muscle
35	chr8:126164800-126186800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr8:126165000-126180400	Weak transcription	NHEK	skin
37	chr8:126165000-126180600	Weak transcription	HMEC	breast
38	chr8:126166000-126200200	Weak transcription	Dnd41	blood
39	chr8:126167000-126187000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
40	chr8:126167000-126200400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
41	chr8:126169800-126187200	Weak transcription	Colonic Mucosa	Colon
42	chr8:126170600-126200600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr8:126171000-126199200	Weak transcription	Primary T helper cells fromperipheralblood	blood
44	chr8:126171200-126183600	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr8:126171800-126180600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr8:126171800-126181800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr8:126172000-126187000	Weak transcription	Primary hematopoietic stem cells	blood
48	chr8:126172000-126201000	Weak transcription	Fetal Thymus	thymus
49	chr8:126172800-126180400	Weak transcription	Sigmoid Colon	Sigmoid Colon
50	chr8:126172800-126180600	Weak transcription	Primary T cells from cord blood	blood

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