Variant report

Variant	rs11685011
Chromosome Location	chr2:33757554-33757555
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:33756995..33759819-chr2:33761668..33764619,2	MCF-7	breast:
2	chr2:33756872..33758889-chr2:37458168..37460759,2	K562	blood:

Variant related genes	Relation type
ENSG00000115816	Chromatin interaction
ENSG00000003509	Chromatin interaction

rs_ID	r²[population]
rs11685205	0.83[ASW][hapmap];0.81[JPT][hapmap];0.82[MEX][hapmap];0.82[ASN][1000 genomes]
rs11691097	0.81[JPT][hapmap]
rs7597095	0.81[JPT][hapmap]

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:33710400-33775400	Weak transcription	Pancreas	Pancrea
2	chr2:33735400-33761800	Weak transcription	Spleen	Spleen
3	chr2:33737600-33760800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr2:33738600-33782800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr2:33738800-33777200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr2:33739200-33761800	Weak transcription	Fetal Muscle Trunk	muscle
7	chr2:33740800-33790000	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr2:33744800-33758200	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr2:33747200-33757600	Weak transcription	Psoas Muscle	Psoas
10	chr2:33747400-33761800	Weak transcription	Aorta	Aorta
11	chr2:33747800-33780200	Weak transcription	Brain Anterior Caudate	brain
12	chr2:33748000-33761800	Weak transcription	Fetal Stomach	stomach
13	chr2:33748000-33774400	Weak transcription	Stomach Smooth Muscle	stomach
14	chr2:33748000-33790400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr2:33748200-33780200	Weak transcription	Brain Angular Gyrus	brain
16	chr2:33752800-33757800	Enhancers	NHDF-Ad	bronchial
17	chr2:33753000-33760600	Weak transcription	Adipose Nuclei	Adipose
18	chr2:33753400-33757800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr2:33754200-33758000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr2:33754200-33760400	Weak transcription	Brain Cingulate Gyrus	brain
21	chr2:33754200-33761800	Weak transcription	Primary hematopoietic stem cells	blood
22	chr2:33754600-33757800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr2:33754600-33757800	Enhancers	NHLF	lung
24	chr2:33754600-33758400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr2:33755000-33758000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr2:33755000-33779800	Weak transcription	Small Intestine	intestine
27	chr2:33755200-33762800	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr2:33755200-33767800	Weak transcription	Liver	Liver
29	chr2:33755400-33779800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr2:33756200-33759000	Genic enhancers	Primary B cells from peripheral blood	blood
31	chr2:33756400-33759200	Enhancers	Skeletal Muscle Female	skeletal muscle
32	chr2:33756600-33757600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr2:33756600-33758800	Enhancers	Skeletal Muscle Male	skeletal muscle
34	chr2:33757000-33757600	Genic enhancers	Fetal Heart	heart
35	chr2:33757000-33757600	Enhancers	Lung	lung
36	chr2:33757000-33758600	Enhancers	Primary B cells from cord blood	blood
37	chr2:33757000-33780000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr2:33757200-33759000	Genic enhancers	GM12878-XiMat	blood
39	chr2:33757200-33760200	Weak transcription	Brain Substantia Nigra	brain
40	chr2:33757200-33760400	Weak transcription	HSMMtube	muscle
41	chr2:33757200-33760600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr2:33757200-33760600	Weak transcription	Brain Hippocampus Middle	brain
43	chr2:33757200-33760800	Weak transcription	Fetal Muscle Leg	muscle
44	chr2:33757200-33760800	Weak transcription	Right Ventricle	heart
45	chr2:33757200-33765400	Weak transcription	Right Atrium	heart
46	chr2:33757200-33809800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr2:33757400-33760400	Weak transcription	HSMM	muscle
48	chr2:33757400-33760600	Weak transcription	Left Ventricle	heart
49	chr2:33757400-33761800	Weak transcription	Ovary	ovary

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