Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:86721706..86723573-chr4:86724471..86726951,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs7675429	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7689056	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7693640	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7699404	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3450999	chr4:86485840-86773745	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
2	nsv879517	chr4:86677107-86739805	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86701000-86728800	Weak transcription	Right Ventricle	heart
2	chr4:86709000-86727000	Weak transcription	HSMMtube	muscle
3	chr4:86709200-86727000	Weak transcription	HSMM	muscle
4	chr4:86718200-86728400	Weak transcription	Left Ventricle	heart
5	chr4:86718200-86733800	Weak transcription	Gastric	stomach
6	chr4:86719000-86727600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr4:86719400-86730800	Weak transcription	Primary B cells from cord blood	blood
8	chr4:86719600-86727200	Weak transcription	Adipose Nuclei	Adipose
9	chr4:86720400-86727200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr4:86721800-86727000	Weak transcription	NHDF-Ad	bronchial
11	chr4:86722000-86731400	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr4:86722200-86727000	Weak transcription	Primary neutrophils fromperipheralblood	blood
13	chr4:86722200-86728600	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr4:86726200-86727600	Genic enhancers	HUVEC	blood vessel
15	chr4:86726400-86727200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr4:86726400-86727400	Strong transcription	Primary B cells from peripheral blood	blood
17	chr4:86726400-86727800	Enhancers	Fetal Muscle Leg	muscle
18	chr4:86726400-86728000	Enhancers	Fetal Kidney	kidney
19	chr4:86726600-86728600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr4:86726800-86727000	Enhancers	iPS-20b Cell Line	embryonic stem cell

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