Variant report

Variant rs11740916
Chromosome Location chr5:80599928-80599929
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80598000-80605200 Weak transcription Ovary ovary
2 chr5:80598200-80612400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:80598400-80600600 Weak transcription Colonic Mucosa Colon
4 chr5:80598400-80600600 Weak transcription Fetal Muscle Trunk muscle
5 chr5:80598400-80600600 Weak transcription Thymus Thymus
6 chr5:80598400-80601200 Weak transcription Esophagus oesophagus
7 chr5:80598400-80604800 Weak transcription Primary hematopoietic stem cells blood
8 chr5:80598400-80605200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr5:80598400-80606800 Weak transcription H1 Cell Line embryonic stem cell
10 chr5:80598400-80606800 Weak transcription Right Ventricle heart
11 chr5:80598400-80611200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:80598600-80600000 Enhancers NH-A brain
13 chr5:80598600-80600200 Enhancers Muscle Satellite Cultured Cells --
14 chr5:80598600-80600200 Enhancers Liver Liver
15 chr5:80598600-80600200 Enhancers HMEC breast
16 chr5:80598600-80600200 Enhancers Osteobl bone
17 chr5:80598600-80600400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr5:80598600-80600600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr5:80598600-80600600 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr5:80598600-80600600 Weak transcription Primary monocytes fromperipheralblood blood
21 chr5:80598600-80600600 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr5:80598600-80600600 Weak transcription Fetal Muscle Leg muscle
23 chr5:80598600-80600600 Weak transcription Fetal Thymus thymus
24 chr5:80598600-80600600 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr5:80598600-80600600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr5:80598600-80600600 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr5:80598600-80600800 Weak transcription H9 Cell Line embryonic stem cell
28 chr5:80598600-80600800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr5:80598600-80600800 Weak transcription Colon Smooth Muscle Colon
30 chr5:80598600-80600800 Weak transcription Fetal Intestine Large intestine
31 chr5:80598600-80601200 Weak transcription Spleen Spleen
32 chr5:80598600-80604400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr5:80598600-80604400 Weak transcription Psoas Muscle Psoas
34 chr5:80598600-80604800 Weak transcription Primary B cells from cord blood blood
35 chr5:80598600-80605000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr5:80598600-80605000 Weak transcription Placenta Placenta
37 chr5:80598600-80605000 Weak transcription Left Ventricle heart
38 chr5:80598600-80605000 Weak transcription HUVEC blood vessel
39 chr5:80598600-80605200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr5:80598600-80605400 Weak transcription Primary B cells from peripheral blood blood
41 chr5:80598600-80606400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr5:80598600-80606400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr5:80598600-80606400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr5:80598600-80606400 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr5:80598600-80606600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr5:80598600-80606600 Weak transcription Aorta Aorta
47 chr5:80598600-80606600 Weak transcription Brain Hippocampus Middle brain
48 chr5:80598600-80606600 Weak transcription Fetal Intestine Small intestine
49 chr5:80598600-80606600 Weak transcription Lung lung
50 chr5:80598600-80606600 Weak transcription Rectal Smooth Muscle rectum

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