Variant report

Variant	rs11760438
Chromosome Location	chr7:39425403-39425404
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1019083	0.89[CEU][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10951601	0.86[CEU][hapmap];0.82[EUR][1000 genomes]
rs10951602	0.90[CEU][hapmap]
rs11761411	0.80[CEU][hapmap]
rs12533451	0.86[CEU][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12533481	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17619162	0.85[CEU][hapmap];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17686887	0.90[CEU][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17701660	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2074935	0.85[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2074937	0.85[CEU][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2299139	0.90[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3823619	0.86[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4437552	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs59663839	0.82[EUR][1000 genomes]
rs6942833	0.85[CHB][hapmap]
rs73121835	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73123797	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73125530	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021180	chr7:39424988-39642261	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:39425200-39426000	Enhancers	Fetal Muscle Leg	muscle
2	chr7:39425200-39426800	Enhancers	Fetal Muscle Trunk	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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