Variant report

Variant	rs11761501
Chromosome Location	chr7:101814084-101814085
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:101812896..101815605-chr7:101816057..101818792,2	K562	blood:
2	chr7:101804671..101808836-chr7:101810713..101814801,4	K562	blood:
3	chr7:101798034..101799716-chr7:101813245..101815960,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000258040	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17498137	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1882739	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs201506	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs3810769	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4727519	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62484862	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs62484929	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101784800-101814400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr7:101784800-101821600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr7:101784800-101822600	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr7:101794800-101816800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr7:101797000-101814200	Weak transcription	Hela-S3	cervix
6	chr7:101797200-101818400	Weak transcription	Colon Smooth Muscle	Colon
7	chr7:101797200-101818600	Weak transcription	Rectal Smooth Muscle	rectum
8	chr7:101797200-101821400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr7:101797200-101827800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr7:101797200-101832000	Weak transcription	Fetal Heart	heart
11	chr7:101797800-101852200	Weak transcription	NHEK	skin
12	chr7:101799800-101815000	Weak transcription	K562	blood
13	chr7:101800400-101850000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr7:101800600-101851800	Strong transcription	Fetal Intestine Small	intestine
15	chr7:101801200-101819800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr7:101801200-101864000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr7:101805400-101862200	Strong transcription	Primary neutrophils fromperipheralblood	blood
18	chr7:101807400-101821400	Weak transcription	Aorta	Aorta
19	chr7:101808000-101820800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr7:101808200-101817000	Weak transcription	Colonic Mucosa	Colon
21	chr7:101808200-101818600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr7:101808200-101821400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr7:101808200-101824200	Strong transcription	Dnd41	blood
24	chr7:101808200-101840200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr7:101808400-101868400	Strong transcription	Thymus	Thymus
26	chr7:101810000-101816600	Weak transcription	Primary B cells from peripheral blood	blood
27	chr7:101810000-101821600	Weak transcription	Esophagus	oesophagus
28	chr7:101810200-101815000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr7:101810400-101816800	Weak transcription	Gastric	stomach
30	chr7:101810400-101820800	Weak transcription	Right Ventricle	heart
31	chr7:101811800-101819800	Strong transcription	Primary T cells from cord blood	blood
32	chr7:101812000-101814200	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr7:101812000-101814400	Enhancers	Cortex derived primary cultured neurospheres	brain
34	chr7:101812200-101815000	Strong transcription	Primary hematopoietic stem cells	blood
35	chr7:101812400-101814200	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr7:101812400-101814200	Enhancers	Brain Substantia Nigra	brain
37	chr7:101812400-101822600	Weak transcription	Small Intestine	intestine
38	chr7:101812400-101860800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
39	chr7:101812600-101814200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr7:101812600-101814200	Genic enhancers	Fetal Muscle Leg	muscle
41	chr7:101812600-101814200	Enhancers	Right Atrium	heart
42	chr7:101812600-101814400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr7:101812600-101814600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr7:101812600-101863200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr7:101812600-101867000	Strong transcription	Primary monocytes fromperipheralblood	blood
46	chr7:101812600-101867000	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr7:101812800-101814400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
48	chr7:101812800-101815200	Strong transcription	HepG2	liver
49	chr7:101812800-101817800	Strong transcription	Rectal Mucosa Donor 29	rectum
50	chr7:101812800-101819400	Strong transcription	Fetal Thymus	thymus

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