Variant report

Variant	rs11761864
Chromosome Location	chr7:104218575-104218576
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10254402	0.85[JPT][hapmap]
rs10266072	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap]
rs10480656	0.83[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs11972379	0.86[JPT][hapmap]
rs12705232	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13227694	0.86[JPT][hapmap]
rs13232800	0.86[JPT][hapmap]
rs13235175	0.86[JPT][hapmap]
rs13237905	0.86[JPT][hapmap]
rs4140743	0.86[JPT][hapmap]
rs4335061	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs4354244	0.83[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap]
rs4400323	0.83[CHB][hapmap];0.89[CHD][hapmap];1.00[JPT][hapmap]
rs4406342	0.86[JPT][hapmap]
rs6969323	1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs7780878	1.00[JPT][hapmap]
rs7781577	0.86[JPT][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11761864	COG5	cis	parietal	SCAN

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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