The 2.0 version of rSNPBase

Variant report

Variant rs11799875
Chromosome Location chr1:93662402-93662403
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93646800-93664600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:93647000-93663600 Weak transcription Fetal Stomach stomach
3 chr1:93647000-93664600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:93647000-93688000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:93647000-93688600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:93647000-93756400 Weak transcription Gastric stomach
7 chr1:93647200-93664200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr1:93647200-93664200 Weak transcription Fetal Intestine Small intestine
9 chr1:93647200-93664400 Weak transcription Fetal Muscle Leg muscle
10 chr1:93647200-93664600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:93647200-93664600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:93647200-93667600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:93647200-93667600 Weak transcription Adipose Nuclei Adipose
14 chr1:93647200-93668200 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:93647200-93681200 Weak transcription HUVEC blood vessel
16 chr1:93647200-93684400 Weak transcription NH-A brain
17 chr1:93647200-93685000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:93647200-93707400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:93647400-93664800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:93647400-93667400 Weak transcription Duodenum Mucosa Duodenum
22 chr1:93647600-93664400 Weak transcription NHLF lung
23 chr1:93647600-93670400 Weak transcription Liver Liver
24 chr1:93647600-93706600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:93647800-93665000 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr1:93647800-93667800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:93648400-93672200 Weak transcription A549 lung
28 chr1:93648600-93666000 Weak transcription NHEK skin
29 chr1:93649000-93684800 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr1:93650000-93666000 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr1:93651000-93684800 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr1:93651400-93678000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:93651600-93662800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:93651600-93663600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:93654200-93664000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:93654200-93708400 Weak transcription Esophagus oesophagus
37 chr1:93654600-93708000 Weak transcription Ovary ovary
38 chr1:93654800-93665800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:93655200-93674000 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr1:93655400-93664600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:93655600-93665800 Weak transcription HepG2 liver
42 chr1:93656400-93668000 Weak transcription Fetal Lung lung
43 chr1:93656400-93686200 Weak transcription Aorta Aorta
44 chr1:93656600-93663600 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr1:93656800-93669000 Strong transcription HUES64 Cell Line embryonic stem cell
46 chr1:93657000-93682000 Strong transcription Dnd41 blood
47 chr1:93657600-93708400 Weak transcription Left Ventricle heart
48 chr1:93658400-93666800 Weak transcription Brain Germinal Matrix brain
49 chr1:93658600-93664800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:93658600-93667800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015