Variant report

Variant rs11800779
Chromosome Location chr1:94245983-94245984
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94236200-94247400 Weak transcription Fetal Intestine Small intestine
3 chr1:94241000-94247400 Enhancers HMEC breast
4 chr1:94241000-94249000 Enhancers Hela-S3 cervix
5 chr1:94241200-94248400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:94243000-94247800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:94243600-94248400 Enhancers Placenta Placenta
8 chr1:94244000-94248000 Enhancers Placenta Amnion Placenta Amnion
9 chr1:94244200-94246200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:94244200-94246600 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:94244400-94246400 Enhancers HUVEC blood vessel
12 chr1:94244400-94246600 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr1:94244600-94246200 Flanking Active TSS A549 lung
14 chr1:94244800-94246000 Enhancers HUES64 Cell Line embryonic stem cell
15 chr1:94244800-94246000 Enhancers HSMM muscle
16 chr1:94245000-94246000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:94245000-94246000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:94245000-94246000 Enhancers Osteobl bone
19 chr1:94245000-94246200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:94245000-94246200 Flanking Active TSS NHEK skin
21 chr1:94245200-94246000 Enhancers HUES48 Cell Line embryonic stem cell
22 chr1:94245200-94246000 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr1:94245200-94246000 Enhancers Skeletal Muscle Male skeletal muscle
24 chr1:94245200-94246200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:94245200-94246200 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr1:94245400-94246000 Enhancers H1 Cell Line embryonic stem cell
27 chr1:94245400-94246000 Enhancers HUES6 Cell Line embryonic stem cell
28 chr1:94245400-94246000 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr1:94245400-94246000 Enhancers Left Ventricle heart
30 chr1:94245400-94246200 Enhancers ES-WA7 Cell Line embryonic stem cell
31 chr1:94245600-94253000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:94245800-94246200 Enhancers Muscle Satellite Cultured Cells --
33 chr1:94245800-94246200 Enhancers NH-A brain
34 chr1:94245800-94247800 Weak transcription HepG2 liver
35 chr1:94245800-94248400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:94245800-94249000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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