The 2.0 version of rSNPBase

Variant report

Variant rs11805379
Chromosome Location chr1:94209893-94209894
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94199400-94217400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:94206000-94210600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:94206000-94212600 Weak transcription HMEC breast
4 chr1:94206200-94211600 Weak transcription Spleen Spleen
5 chr1:94206800-94210000 Weak transcription Left Ventricle heart
6 chr1:94206800-94212400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:94206800-94212400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:94207000-94210000 Weak transcription Fetal Lung lung
9 chr1:94207000-94211200 Weak transcription Adipose Nuclei Adipose
10 chr1:94208200-94215600 Weak transcription Aorta Aorta
11 chr1:94209000-94211000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:94209400-94210800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:94209400-94211200 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr1:94209400-94212400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:94209400-94212600 Enhancers NHEK skin
16 chr1:94209800-94210400 Enhancers Small Intestine intestine
17 chr1:94209800-94211800 Enhancers GM12878-XiMat blood
18 chr1:94209800-94212600 Enhancers Fetal Thymus thymus

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Last update: Aug 31, 2015