Variant report

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10864155	1.00[ASN][1000 genomes]
rs11120466	0.87[AFR][1000 genomes]
rs11805210	0.81[AFR][1000 genomes]
rs11806269	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11810831	0.95[AFR][1000 genomes]
rs12118235	1.00[ASN][1000 genomes]
rs12118508	1.00[ASN][1000 genomes]
rs12118830	1.00[ASN][1000 genomes]
rs12121939	1.00[ASN][1000 genomes]
rs12123237	1.00[ASN][1000 genomes]
rs12127285	1.00[ASN][1000 genomes]
rs12132201	1.00[ASN][1000 genomes]
rs12141564	1.00[ASN][1000 genomes]
rs1339404	1.00[ASN][1000 genomes]
rs1339407	1.00[ASN][1000 genomes]
rs17023977	1.00[ASN][1000 genomes]
rs17024348	1.00[ASN][1000 genomes]
rs17024370	1.00[ASN][1000 genomes]
rs17604089	1.00[ASN][1000 genomes]
rs17606405	1.00[ASN][1000 genomes]
rs34999070	1.00[ASN][1000 genomes]
rs56069026	0.83[AFR][1000 genomes]
rs56662669	1.00[ASN][1000 genomes]
rs56720553	1.00[ASN][1000 genomes]
rs57440894	1.00[ASN][1000 genomes]
rs60894494	0.95[AFR][1000 genomes]
rs61255106	0.80[AFR][1000 genomes]
rs74140846	1.00[ASN][1000 genomes]
rs74140868	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74140948	1.00[ASN][1000 genomes]
rs74140950	1.00[ASN][1000 genomes]
rs7519026	0.83[AFR][1000 genomes]
rs7531398	1.00[ASN][1000 genomes]
rs7543935	1.00[ASN][1000 genomes]
rs7551303	1.00[ASN][1000 genomes]
rs7553910	1.00[ASN][1000 genomes]
rs755576	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468105	chr1:215167236-215248417	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv549182	chr1:215167236-215248417	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215177200-215211200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:215182400-215188200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:215182600-215191600	Weak transcription	Osteobl	bone
4	chr1:215183400-215191600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr1:215184000-215188000	Weak transcription	NHDF-Ad	bronchial

Quick Search: