Variant report
| Variant | rs11820544 |
|---|---|
| Chromosome Location | chr11:16930967-16930968 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:16916000-16931000 | Weak transcription | Spleen | Spleen |
| 2 | chr11:16919800-16933600 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr11:16922000-16934000 | Weak transcription | HepG2 | liver |
| 4 | chr11:16925200-16939800 | Weak transcription | Colonic Mucosa | Colon |
| 5 | chr11:16925600-16939800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 6 | chr11:16927200-16932600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 7 | chr11:16927400-16931200 | Weak transcription | Fetal Intestine Large | intestine |
| 8 | chr11:16927400-16932400 | Weak transcription | HMEC | breast |
| 9 | chr11:16927400-16932600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr11:16927400-16932800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 11 | chr11:16927400-16934800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr11:16927600-16931000 | Weak transcription | Esophagus | oesophagus |
| 13 | chr11:16927600-16931000 | Weak transcription | Gastric | stomach |
| 14 | chr11:16927600-16931000 | Weak transcription | Right Atrium | heart |
| 15 | chr11:16927600-16931000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 16 | chr11:16927600-16932000 | Weak transcription | Right Ventricle | heart |
| 17 | chr11:16927600-16932800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 18 | chr11:16927600-16933600 | Weak transcription | Brain Anterior Caudate | brain |
| 19 | chr11:16927600-16934200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 20 | chr11:16927600-16939200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr11:16927800-16931000 | Weak transcription | Fetal Intestine Small | intestine |
| 22 | chr11:16927800-16931000 | Weak transcription | Pancreas | Pancrea |
| 23 | chr11:16927800-16931800 | Weak transcription | Fetal Lung | lung |
| 24 | chr11:16927800-16939400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 25 | chr11:16927800-16944400 | Weak transcription | A549 | lung |
| 26 | chr11:16929800-16933200 | Enhancers | Fetal Heart | heart |
| 27 | chr11:16929800-16935200 | Enhancers | Stomach Mucosa | stomach |
| 28 | chr11:16930400-16931600 | Enhancers | Left Ventricle | heart |
| 29 | chr11:16930800-16931000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 30 | chr11:16930800-16931000 | Flanking Active TSS | GM12878-XiMat | blood |
| 31 | chr11:16930800-16932200 | Enhancers | Small Intestine | intestine |
| 32 | chr11:16930800-16934600 | Enhancers | Duodenum Mucosa | Duodenum |
