Variant report
| Variant | rs11830560 |
|---|---|
| Chromosome Location | chr12:10859306-10859307 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:10842000-10866000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr12:10845800-10869400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr12:10846400-10862400 | Weak transcription | Esophagus | oesophagus |
| 4 | chr12:10846400-10868200 | Strong transcription | HUVEC | blood vessel |
| 5 | chr12:10847200-10861400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr12:10847400-10861200 | Strong transcription | HSMM | muscle |
| 7 | chr12:10847800-10868200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 8 | chr12:10847800-10868800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 9 | chr12:10848000-10868200 | Weak transcription | Stomach Mucosa | stomach |
| 10 | chr12:10848000-10868600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr12:10848400-10868400 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 12 | chr12:10848400-10869000 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 13 | chr12:10848600-10867800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 14 | chr12:10848600-10868400 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr12:10848600-10868800 | Strong transcription | Osteobl | bone |
| 16 | chr12:10848600-10869000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 17 | chr12:10848800-10868400 | Strong transcription | Placenta | Placenta |
| 18 | chr12:10848800-10869000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 19 | chr12:10848800-10869200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 20 | chr12:10848800-10869400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 21 | chr12:10849000-10868400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 22 | chr12:10849200-10869200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 23 | chr12:10849200-10870000 | Strong transcription | Liver | Liver |
| 24 | chr12:10849400-10865800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 25 | chr12:10849400-10867200 | Strong transcription | Primary hematopoietic stem cells | blood |
| 26 | chr12:10849400-10869400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 27 | chr12:10849600-10861400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 28 | chr12:10849600-10873600 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr12:10849800-10859600 | Strong transcription | HSMMtube | muscle |
| 30 | chr12:10849800-10862000 | Weak transcription | Brain Hippocampus Middle | brain |
| 31 | chr12:10849800-10862200 | Strong transcription | NHEK | skin |
| 32 | chr12:10849800-10863200 | Strong transcription | Duodenum Mucosa | Duodenum |
| 33 | chr12:10849800-10867400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 34 | chr12:10849800-10867800 | Strong transcription | Dnd41 | blood |
| 35 | chr12:10849800-10868400 | Strong transcription | Hela-S3 | cervix |
| 36 | chr12:10849800-10868600 | Strong transcription | A549 | lung |
| 37 | chr12:10849800-10869200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 38 | chr12:10849800-10869200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 39 | chr12:10849800-10870400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 40 | chr12:10849800-10871000 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 41 | chr12:10850000-10869000 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 42 | chr12:10850000-10870000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr12:10850000-10873800 | Weak transcription | Fetal Brain Male | brain |
| 44 | chr12:10850400-10863600 | Strong transcription | Fetal Intestine Large | intestine |
| 45 | chr12:10850600-10869200 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 46 | chr12:10850800-10860800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 47 | chr12:10850800-10867200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 48 | chr12:10850800-10870400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 49 | chr12:10851000-10864400 | Strong transcription | HepG2 | liver |
| 50 | chr12:10852200-10861600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
