The 2.0 version of rSNPBase

Variant report

Variant rs11831336
Chromosome Location chr12:86198594-86198595
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:86191400-86207400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:86194200-86214000 Weak transcription HMEC breast
3 chr12:86196400-86198800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr12:86196600-86199200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr12:86196800-86198800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr12:86197000-86199200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr12:86197000-86199800 Enhancers NH-A brain
8 chr12:86197000-86207800 Weak transcription Fetal Heart heart
9 chr12:86197200-86199400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:86197400-86198600 Enhancers NHEK skin
11 chr12:86197400-86199000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr12:86197400-86207800 Weak transcription Right Ventricle heart
13 chr12:86197600-86214600 Weak transcription HUVEC blood vessel
14 chr12:86197800-86199000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:86197800-86199800 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr12:86197800-86200200 Weak transcription Fetal Muscle Leg muscle
17 chr12:86197800-86200400 Weak transcription Fetal Intestine Large intestine
18 chr12:86197800-86200400 Weak transcription Lung lung
19 chr12:86198000-86200400 Weak transcription Fetal Muscle Trunk muscle
20 chr12:86198200-86198800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr12:86198200-86199200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr12:86198400-86198600 ZNF genes & repeats Left Ventricle heart
23 chr12:86198400-86198600 Flanking Active TSS HSMM muscle
24 chr12:86198400-86198600 Flanking Active TSS NHDF-Ad bronchial
25 chr12:86198400-86198600 Flanking Active TSS Osteobl bone
26 chr12:86198400-86199400 Genic enhancers Hela-S3 cervix
27 chr12:86198400-86199600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr12:86198400-86199600 Flanking Active TSS HSMMtube muscle
29 chr12:86198400-86199800 Flanking Active TSS Muscle Satellite Cultured Cells --
30 chr12:86198400-86199800 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015