Variant report

Variant	rs11851856
Chromosome Location	chr14:77964500-77964501
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:77924491..77927029-chr14:77963244..77966693,3	MCF-7	breast:
2	chr14:77955188..77957338-chr14:77963090..77964747,2	MCF-7	breast:
3	chr14:77929404..77931486-chr14:77963841..77966397,2	MCF-7	breast:
4	chr14:77924153..77926705-chr14:77962100..77964578,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000151445	Chromatin interaction
ENSG00000100591	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832835	chr14:77906706-78095207	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	esv3341035	chr14:77964024-77966572	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77964200-77964600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
2	chr14:77964200-77964600	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
3	chr14:77964200-77964600	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
4	chr14:77964200-77964600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
5	chr14:77964200-77964600	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
6	chr14:77964200-77964600	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
7	chr14:77964200-77964600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr14:77964200-77964600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr14:77964200-77964600	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum
10	chr14:77964200-77964600	Bivalent/Poised TSS	Fetal Kidney	kidney
11	chr14:77964200-77964600	Bivalent Enhancer	Fetal Muscle Leg	muscle
12	chr14:77964200-77964600	Bivalent Enhancer	Fetal Stomach	stomach
13	chr14:77964200-77964600	Enhancers	Gastric	stomach
14	chr14:77964200-77964600	Enhancers	Spleen	Spleen
15	chr14:77964200-77964600	Flanking Bivalent TSS/Enh	A549	lung
16	chr14:77964200-77964600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
17	chr14:77964200-77964800	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
18	chr14:77964200-77964800	Flanking Active TSS	Brain Anterior Caudate	brain
19	chr14:77964200-77964800	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
20	chr14:77964200-77964800	Flanking Bivalent TSS/Enh	Duodenum Mucosa	Duodenum
21	chr14:77964200-77964800	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
22	chr14:77964200-77965000	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
23	chr14:77964200-77965000	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
24	chr14:77964200-77965000	Flanking Bivalent TSS/Enh	GM12878-XiMat	blood
25	chr14:77964200-77965200	Bivalent Enhancer	Stomach Mucosa	stomach
26	chr14:77964200-77965600	Bivalent/Poised TSS	NHEK	skin
27	chr14:77964200-77965800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
28	chr14:77964200-77965800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
29	chr14:77964200-77965800	Enhancers	Liver	Liver
30	chr14:77964200-77966000	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr14:77964200-77966000	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
32	chr14:77964200-77966000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
33	chr14:77964200-77966000	Bivalent/Poised TSS	HepG2	liver
34	chr14:77964200-77966600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
35	chr14:77964200-77966600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
36	chr14:77964400-77964600	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
37	chr14:77964400-77964600	Bivalent/Poised TSS	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr14:77964400-77964600	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr14:77964400-77964600	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
40	chr14:77964400-77964600	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
41	chr14:77964400-77964600	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
42	chr14:77964400-77964600	Flanking Bivalent TSS/Enh	Primary T helper 17 cells PMA-I stimulated	--
43	chr14:77964400-77964600	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
44	chr14:77964400-77964600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr14:77964400-77964600	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr14:77964400-77964600	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
47	chr14:77964400-77964600	Bivalent/Poised TSS	Aorta	Aorta
48	chr14:77964400-77964600	Active TSS	Brain Angular Gyrus	brain
49	chr14:77964400-77964600	Bivalent/Poised TSS	Brain Germinal Matrix	brain
50	chr14:77964400-77964600	Bivalent Enhancer	Colonic Mucosa	Colon

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