The 2.0 version of rSNPBase

Variant report

Variant rs11852564
Chromosome Location chr15:76720082-76720083
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76639800-76727400 Weak transcription Right Ventricle heart
2 chr15:76673200-76727400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr15:76693600-76720400 Weak transcription Colon Smooth Muscle Colon
4 chr15:76695800-76726000 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr15:76696600-76720600 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr15:76697000-76720800 Weak transcription Aorta Aorta
7 chr15:76697000-76722200 Weak transcription Spleen Spleen
8 chr15:76697000-76723400 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr15:76697000-76724000 Weak transcription Brain Substantia Nigra brain
10 chr15:76697000-76724400 Weak transcription Pancreas Pancrea
11 chr15:76697000-76726000 Weak transcription Duodenum Mucosa Duodenum
12 chr15:76697000-76726400 Weak transcription Stomach Smooth Muscle stomach
13 chr15:76697200-76720400 Weak transcription Liver Liver
14 chr15:76711200-76720800 Weak transcription Left Ventricle heart
15 chr15:76711600-76721400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr15:76711600-76728400 Weak transcription Placenta Placenta
17 chr15:76711600-76767200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr15:76713000-76720600 Weak transcription Primary B cells from cord blood blood
19 chr15:76716600-76725800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr15:76717000-76739000 Weak transcription Gastric stomach
21 chr15:76717400-76722200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr15:76717400-76724800 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr15:76717600-76724200 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr15:76717600-76726000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr15:76718000-76732800 Weak transcription Brain Hippocampus Middle brain
26 chr15:76718200-76721200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr15:76718600-76720200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr15:76718600-76727600 Weak transcription Brain Germinal Matrix brain
29 chr15:76718600-76730400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr15:76718800-76720200 Weak transcription Fetal Intestine Small intestine
31 chr15:76718800-76720200 Weak transcription Thymus Thymus
32 chr15:76718800-76721800 Weak transcription Ovary ovary
33 chr15:76718800-76724400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr15:76718800-76724400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr15:76718800-76725600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:76718800-76732000 Weak transcription Fetal Stomach stomach
37 chr15:76718800-76736200 Weak transcription Lung lung
38 chr15:76719000-76720600 Weak transcription Fetal Muscle Leg muscle
39 chr15:76719000-76720800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr15:76719000-76722200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr15:76719000-76724400 Weak transcription Fetal Thymus thymus
42 chr15:76719000-76726600 Weak transcription Primary T cells fromperipheralblood blood
43 chr15:76719200-76720400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr15:76719200-76725200 Weak transcription Brain Cingulate Gyrus brain
45 chr15:76719200-76726400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr15:76719400-76722200 Weak transcription Fetal Muscle Trunk muscle
47 chr15:76719400-76724200 Weak transcription Adipose Nuclei Adipose
48 chr15:76719400-76726800 Weak transcription Primary B cells from peripheral blood blood
49 chr15:76719600-76720400 Strong transcription Fetal Intestine Large intestine
50 chr15:76719600-76720800 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015