Variant report
| Variant | rs11854548 |
|---|---|
| Chromosome Location | chr15:78816896-78816897 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:78800600-78822200 | Weak transcription | Pancreas | Pancrea |
| 2 | chr15:78800600-78823600 | Weak transcription | Gastric | stomach |
| 3 | chr15:78800800-78820800 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr15:78800800-78823400 | Weak transcription | Colon Smooth Muscle | Colon |
| 5 | chr15:78800800-78825600 | Weak transcription | Brain Angular Gyrus | brain |
| 6 | chr15:78800800-78830800 | Weak transcription | Right Ventricle | heart |
| 7 | chr15:78800800-78832000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 8 | chr15:78800800-78832200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr15:78800800-78832200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 10 | chr15:78800800-78832400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr15:78801000-78817800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 12 | chr15:78801000-78818200 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr15:78801000-78825600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr15:78801000-78829600 | Weak transcription | Fetal Muscle Leg | muscle |
| 15 | chr15:78801000-78832200 | Weak transcription | Adipose Nuclei | Adipose |
| 16 | chr15:78801000-78832200 | Weak transcription | Fetal Kidney | kidney |
| 17 | chr15:78801000-78832200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 18 | chr15:78801000-78832200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 19 | chr15:78801000-78832200 | Weak transcription | A549 | lung |
| 20 | chr15:78803000-78832200 | Weak transcription | Primary T cells from cord blood | blood |
| 21 | chr15:78810400-78818200 | Weak transcription | Liver | Liver |
| 22 | chr15:78810600-78832000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 23 | chr15:78810600-78832400 | Weak transcription | Aorta | Aorta |
| 24 | chr15:78810800-78832200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 25 | chr15:78812000-78832200 | Weak transcription | Fetal Stomach | stomach |
| 26 | chr15:78812200-78820400 | Weak transcription | Left Ventricle | heart |
| 27 | chr15:78812400-78832200 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr15:78812600-78832200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 29 | chr15:78816200-78817000 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 30 | chr15:78816600-78832200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr15:78816800-78820400 | Weak transcription | Ovary | ovary |
| 32 | chr15:78816800-78825400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
