Variant report

Variant rs11878207
Chromosome Location chr19:42882576-42882577
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42830800-42884200 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr19:42831600-42882600 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr19:42868600-42882600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr19:42869000-42883400 Weak transcription Primary T cells from cord blood blood
5 chr19:42869000-42884400 Weak transcription Colonic Mucosa Colon
6 chr19:42869600-42890800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:42871400-42890800 Weak transcription Psoas Muscle Psoas
8 chr19:42872000-42884800 Weak transcription A549 lung
9 chr19:42872200-42883800 Weak transcription Fetal Brain Male brain
10 chr19:42874400-42891000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:42874800-42884400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr19:42875200-42882800 Weak transcription GM12878-XiMat blood
13 chr19:42875800-42886000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr19:42876000-42884000 Weak transcription Brain Substantia Nigra brain
15 chr19:42876200-42883800 Weak transcription Colon Smooth Muscle Colon
16 chr19:42876800-42883000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr19:42877200-42890800 Weak transcription Primary B cells from cord blood blood
18 chr19:42877200-42890800 Weak transcription Primary B cells from peripheral blood blood
19 chr19:42878800-42882800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr19:42879400-42885600 Weak transcription Stomach Smooth Muscle stomach
21 chr19:42879400-42891000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr19:42879600-42882800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr19:42879600-42883400 Weak transcription Fetal Lung lung
24 chr19:42879600-42884200 Weak transcription Dnd41 blood
25 chr19:42879600-42890800 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr19:42879800-42883400 Weak transcription Brain Angular Gyrus brain
27 chr19:42879800-42883400 Weak transcription Rectal Smooth Muscle rectum
28 chr19:42879800-42884200 Weak transcription Duodenum Mucosa Duodenum
29 chr19:42879800-42884400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr19:42880000-42885200 Weak transcription Left Ventricle heart
31 chr19:42880000-42891000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr19:42880400-42882600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr19:42880400-42883200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr19:42880400-42883800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr19:42880400-42884600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr19:42880400-42885000 Weak transcription Brain Inferior Temporal Lobe brain
37 chr19:42880400-42885600 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr19:42880400-42891000 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr19:42880600-42882600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:42880600-42882600 Weak transcription Liver Liver
41 chr19:42880600-42883000 Weak transcription Adipose Nuclei Adipose
42 chr19:42880600-42883800 Weak transcription Brain Cingulate Gyrus brain
43 chr19:42880800-42883000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr19:42880800-42883000 Weak transcription Esophagus oesophagus
45 chr19:42880800-42883000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr19:42880800-42883000 Weak transcription Thymus Thymus
47 chr19:42880800-42883400 Weak transcription Pancreas Pancrea
48 chr19:42880800-42884000 Weak transcription Aorta Aorta
49 chr19:42880800-42886000 Weak transcription Spleen Spleen
50 chr19:42880800-42890600 Weak transcription Right Ventricle heart

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